PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_26112
Common NameKK1_027099
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family ERF
Protein Properties Length: 136aa    MW: 15119.2 Da    PI: 8.6133
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_26112genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP245.71.7e-142163148
            AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaia 48
                   ++y GVr +  +gr++AeIr p++   + r++lg+f+t  eAa a++ 
  C.cajan_26112 21 TKYLGVRKRA-WGRYAAEIRNPYT---KERHWLGTFDT-AEAAIAYDI 63
                   699****887.**********865...5**********.*******97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008475.1E-82162IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.107.7E-222279IPR001471AP2/ERF domain
PROSITE profilePS5103215.7642279IPR001471AP2/ERF domain
SuperFamilySSF541712.62E-142280IPR016177DNA-binding domain
CDDcd000183.52E-232278No hitNo description
SMARTSM003806.9E-222285IPR001471AP2/ERF domain
PRINTSPR003673.7E-62334IPR001471AP2/ERF domain
PRINTSPR003673.7E-64561IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 136 aa     Download sequence    Send to blast
MENLRPLIYK SPTRRSSRRS TKYLGVRKRA WGRYAAEIRN PYTKERHWLG TFDTAEAAIA  60
YDISSINICG IINARTNFHY PFLSLPPPPP PPPPTPGLDP SVGGCPEMNG VYEGDDECLV  120
IASILQSFSN SGNCSF
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_26112
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0118107e-76AP011810.1 Glycine max DNA, BAC clone: MiB039C03, complete sequence.
GenBankAP0118137e-76AP011813.1 Glycine max DNA, BAC clone: MiB319A04, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020231638.13e-97ethylene-responsive transcription factor LEP
SwissprotQ3E7037e-24ERF88_ARATH; Ethylene-responsive transcription factor ERF088
TrEMBLA0A151S8G27e-96A0A151S8G2_CAJCA; Ethylene-responsive transcription factor ERF088 family
STRINGXP_007143615.17e-66(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF145131317
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G12890.12e-25ERF family protein