PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_26410
Common NameKK1_026378
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family bHLH
Protein Properties Length: 177aa    MW: 19558.2 Da    PI: 7.5768
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_26410genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH34.34.3e-1158105455
                    HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
            HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                    +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++YI+sLq
  C.cajan_26410  58 SHSLAERARREKISERMKILQDLVPGC----NKVIGKALVLDEIINYIQSLQ 105
                    8*************************9....677*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474594.71E-1852122IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.18E-1052109No hitNo description
Gene3DG3DSA:4.10.280.104.2E-1854123IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.82854104IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.9E-858105IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.8E-1060110IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 177 aa     Download sequence    Send to blast
MEAPLINDST FSSANPSLSE IWPHSQPDAT SLAGNKSPAK PKQDYIHVRA RRGQATDSHS  60
LAERARREKI SERMKILQDL VPGCNKVIGK ALVLDEIINY IQSLQRQIEF LSMKLEAVNS  120
RLNLSPAIEC FPSKEVGTQP FDLAGIIFGS QPARGYDQGS QPAWLHMQID GGFEKAT
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that forms a ternary complex with RSS3 and TIFY11A/JAZ9 to negatively regulate jasmonate-responsive genes. {ECO:0000269|PubMed:23715469}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_26410
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKT0311241e-176KT031124.1 Glycine max clone HN_CCL_216 bHLH transcription factor (Glyma17g10290.1) mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020231076.11e-130transcription factor BHLH089 isoform X1
SwissprotQ69WS32e-66BH094_ORYSJ; Transcription factor BHLH094
TrEMBLA0A151SAA71e-129A0A151SAA7_CAJCA; Transcription factor bHLH79
STRINGGLYMA17G10290.11e-105(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF117134105
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G59640.14e-74BIG PETAL P