PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_26533
Common NameKK1_027877
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family MYB
Protein Properties Length: 223aa    MW: 25859.6 Da    PI: 5.661
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_26533genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding55.11.7e-171461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g WT+eEd++l+d+v+++G  +W++ ++  g+ R++k+c++rw++yl
    C.cajan_26533 14 KGTWTPEEDKKLIDYVTRYGHWNWRLLPKFAGLARCGKSCRLRWLNYL 61
                     799*****************99************************97 PP
2Myb_DNA-binding591.1e-1867111147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      rg+ T+eE+e ++++++ lG++ W++Ia++m+ gRt++++k++w++ 
    C.cajan_26533  67 RGNYTEEEEETIIKLHRHLGNR-WSAIAARMP-GRTDNEIKNYWHTN 111
                      899*******************.*********.***********986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129416.8961IPR017930Myb domain
SuperFamilySSF466899.35E-3011108IPR009057Homeodomain-like
SMARTSM007171.4E-111363IPR001005SANT/Myb domain
PfamPF002491.4E-151461IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.601.2E-231568IPR009057Homeodomain-like
CDDcd001677.07E-101661No hitNo description
PROSITE profilePS5129425.7962116IPR017930Myb domain
SMARTSM007171.3E-1766114IPR001005SANT/Myb domain
PfamPF002493.2E-1767111IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.601.6E-2569115IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 223 aa     Download sequence    Send to blast
MGRTPRCEKN GLKKGTWTPE EDKKLIDYVT RYGHWNWRLL PKFAGLARCG KSCRLRWLNY  60
LRPNVKRGNY TEEEEETIIK LHRHLGNRWS AIAARMPGRT DNEIKNYWHT NLKKRSQQES  120
LTNAQVSNSN DSSPTEPTPN TFKNLHNDSY PSSSTGSEYT TVIVTGDENV VLEDELAFWD  180
ADTDLTSANF WLESFMLDIS NYGPAEPEFF STEFDAELWT HDN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1a5j_A2e-29121155107B-MYB
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_26533
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150392e-37AP015039.1 Vigna angularis var. angularis DNA, chromosome 6, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020232374.11e-167transcription factor MYB14
TrEMBLA0A151S6821e-166A0A151S682_CAJCA; Myb-related protein Myb4
STRINGGLYMA06G45554.11e-113(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF35633186
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31180.13e-65myb domain protein 14