PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_26985
Common NameKK1_028356
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family WRKY
Protein Properties Length: 580aa    MW: 62857.3 Da    PI: 6.7914
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_26985genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY1016.9e-32227284260
                    --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS
           WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 
                    dDgynWrKYGqK+vkgsefprsYY+Ct+++C+vkk  ers+ d++++ei+Y+g+H+h+k
  C.cajan_26985 227 DDGYNWRKYGQKHVKGSEFPRSYYKCTHPNCEVKKLFERSH-DGQITEIIYKGTHDHPK 284
                    8****************************************.***************85 PP
2WRKY105.82.2e-33400458159
                    ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
           WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                    ldDgy+WrKYGqK+v+g+++prsYY+Ct +gCpv+k+ver+++dpk+v++tYeg+Hnh+
  C.cajan_26985 400 LDDGYRWRKYGQKVVRGNPNPRSYYKCTNSGCPVRKHVERASHDPKAVITTYEGKHNHD 458
                    59********************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081123.617221285IPR003657WRKY domain
Gene3DG3DSA:2.20.25.801.6E-27222285IPR003657WRKY domain
SuperFamilySSF1182906.93E-25224285IPR003657WRKY domain
SMARTSM007744.1E-34226284IPR003657WRKY domain
PfamPF031061.7E-24227283IPR003657WRKY domain
Gene3DG3DSA:2.20.25.801.5E-37385460IPR003657WRKY domain
SuperFamilySSF1182902.62E-29392460IPR003657WRKY domain
PROSITE profilePS5081138.733395460IPR003657WRKY domain
SMARTSM007747.3E-39400459IPR003657WRKY domain
PfamPF031063.4E-26401458IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009611Biological Processresponse to wounding
GO:0009961Biological Processresponse to 1-aminocyclopropane-1-carboxylic acid
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 580 aa     Download sequence    Send to blast
MDAGEALSDD PNGSRPNSAA DGAPATGGAR YKLMSPAKLP ISRSPCVTIP PGLSPTSFLE  60
SPVLLSNMKV EPSPTTGSLS MLHQTAHGSV TSAASATFPV TTACFNSNTV DDRKPSFFEF  120
KPHSRSNMTK VPADSDNHAS EKSTQIDGQG KTQAFDSSPF VKNEIADPSN ELSLSSPVQM  180
VSSGAGARVE GDLDELNPRS NIATGLQASQ VDNRGSGLSA AADRVSDDGY NWRKYGQKHV  240
KGSEFPRSYY KCTHPNCEVK KLFERSHDGQ ITEIIYKGTH DHPKPQPNRR YSSGTMMSMQ  300
EERSEKALTG RDDKGSNICG QMSHPADPDS TPELSPVATN DGDLEGTGFL SNRNTDEVDD  360
DDPFSKRRKM DLGNADITPV VKPIREPRVV VQTLSEVDIL DDGYRWRKYG QKVVRGNPNP  420
RSYYKCTNSG CPVRKHVERA SHDPKAVITT YEGKHNHDVP TARNSCHDMA RPASAGGQTR  480
TRPEESDTIS LDLGMGISPT AENTSNNQGR MMLSEFGGNQ THPSNSNFKF VHTTTAPAYF  540
GVLSNNSNPY GSRENTSDSP SLNHSAYPCP QNMGRILMGP
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A9e-37227460877Probable WRKY transcription factor 4
2lex_A9e-37227460877Probable WRKY transcription factor 4
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element. {ECO:0000250|UniProtKB:Q9SI37}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00455DAPTransfer from AT4G26640Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_26985
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKM5203900.0KM520390.1 Macrotyloma uniflorum WRKY mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020232748.10.0probable WRKY transcription factor 20 isoform X1
SwissprotQ93WV00.0WRK20_ARATH; Probable WRKY transcription factor 20
TrEMBLA0A151S5230.0A0A151S523_CAJCA; Putative WRKY transcription factor 20
STRINGGLYMA18G09040.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF39463463
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G26640.20.0WRKY family protein