PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_27255
Common NameKK1_027613
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family Trihelix
Protein Properties Length: 525aa    MW: 58457.8 Da    PI: 6.0528
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_27255genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix97.98.9e-3166150187
       trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 
                    rW++qe+laL+++r++m+ ++r+++ k+plWeevs+km+e g++rs+k+Ckek+en+ k++k++keg++++  ++ +t+++fdqlea
  C.cajan_27255  66 RWPRQETLALLRIRSDMDVAFRDASVKGPLWEEVSRKMAELGYHRSSKKCKEKFENVYKYHKRTKEGRSGK--QDGKTYRFFDQLEA 150
                    8********************************************************************95..67778*******85 PP
2trihelix106.42e-33357442187
       trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 
                    rW+k ev+aLi++r++m+ +++++  k+plWee+s+ mr+ g++r++k+Ckekwen+nk++kk+ke++k+r +e+s+tcpyf+ql+a
  C.cajan_27255 357 RWPKLEVQALIKLRTNMDAKYQENGPKGPLWEEISASMRKLGYNRNAKRCKEKWENINKYFKKVKESNKRR-PEDSKTCPYFHQLDA 442
                    8********************************************************************97.99***********85 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM007177.1E-463125IPR001005SANT/Myb domain
PROSITE profilePS500906.88865123IPR017877Myb-like domain
CDDcd122033.26E-2365130No hitNo description
PfamPF138373.0E-2065151No hitNo description
SMARTSM007170.0019354416IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.601.2E-4356413IPR009057Homeodomain-like
PROSITE profilePS500907.259356414IPR017877Myb-like domain
CDDcd122032.56E-27356421No hitNo description
PfamPF138374.9E-22356443No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 525 aa     Download sequence    Send to blast
MLGDSAVLGA GGGGGEAVAG AVGSGAHEAG SGGGGGGGGG GGAGSNSGDE ERGRIEEGER  60
SFGGNRWPRQ ETLALLRIRS DMDVAFRDAS VKGPLWEEVS RKMAELGYHR SSKKCKEKFE  120
NVYKYHKRTK EGRSGKQDGK TYRFFDQLEA LENHTPTPHS PNPSPKPPQV SSRVAIAPTA  180
TASVITIPQP IVNTPPTNLT IPSYPPTNPT NFPPPNPTSY PTDTFSNSTS SSTSSDETLE  240
GRRKRKRKWK DFFERLMKEV IEKQEDLQKR FLEAIEKREH DRIAREEAWR VQEMQRINRE  300
REILAQERSI AAAKDAAVMS FLQKIAEQQN LVMTNMEIVK VDRNNNGENS VASSSSRWPK  360
LEVQALIKLR TNMDAKYQEN GPKGPLWEEI SASMRKLGYN RNAKRCKEKW ENINKYFKKV  420
KESNKRRPED SKTCPYFHQL DALYREKSKA ESAAEKAESA VAPLMVRPEQ QWPPQQDRDV  480
AMEDAENDDD EYEGEEEEDD EEDEEGGGGG KYEIVANKAS GGSGE
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1241246RRKRKR
2241247RRKRKRK
3242247RKRKRK
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor that binds specific DNA sequence. {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_27255
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150411e-130AP015041.1 Vigna angularis var. angularis DNA, chromosome 8, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020232108.10.0trihelix transcription factor GT-2
SwissprotQ391171e-147TGT2_ARATH; Trihelix transcription factor GT-2
TrEMBLA0A151S7160.0A0A151S716_CAJCA; Uncharacterized protein
STRINGXP_007143535.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF37334181
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G76880.18e-96Trihelix family protein