PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_27281
Common NameKK1_027639
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family ERF
Protein Properties Length: 251aa    MW: 26888.9 Da    PI: 8.4765
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_27281genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP266.55.1e-2162112256
            AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56 
                    +y+GVr+++ +g+W+AeIrdp     + +r++lg+f+tae Aa+a+++a+++++g+
  C.cajan_27281  62 RYRGVRQRP-WGKWAAEIRDPQ----KaARVWLGTFDTAEAAARAYDEAALRFRGN 112
                    7********.**********93....36*************************985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103225.88362119IPR001471AP2/ERF domain
PfamPF008477.6E-1562111IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.103.2E-3362120IPR001471AP2/ERF domain
SuperFamilySSF541716.02E-2362120IPR016177DNA-binding domain
SMARTSM003806.2E-3862125IPR001471AP2/ERF domain
PRINTSPR003674.9E-126374IPR001471AP2/ERF domain
CDDcd000186.33E-1570121No hitNo description
PRINTSPR003674.9E-1285101IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 251 aa     Download sequence    Send to blast
MMPRFMHVSS PPGLSSSSGS GPSLMGPVPA SGWAGQKRTR EDETGGCLTR GSEEESGERR  60
RRYRGVRQRP WGKWAAEIRD PQKAARVWLG TFDTAEAAAR AYDEAALRFR GNRAKLNFPE  120
NVAALRPPLP DSTPAASALL QGAPVQDSSD VLRDYWGYSQ LLSGSGEFHG LDPWLFDSQM  180
ATLQSSSSFL SPPAFPPSSA SFPLFSSPQF GVFRPPPHHP QGAGDAAAAS HFPPSTWSDT  240
AGYPPPPPGP G
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A7e-2361122466ATERF1
3gcc_A7e-2361122466ATERF1
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15762ERRRRY
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_27281
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150419e-80AP015041.1 Vigna angularis var. angularis DNA, chromosome 8, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020232101.11e-178ethylene-responsive transcription factor ERF110
RefseqXP_020232102.11e-178ethylene-responsive transcription factor ERF110
TrEMBLA0A151S6Z81e-177A0A151S6Z8_CAJCA; Ethylene-responsive transcription factor ERF112 family
STRINGXP_007143561.14e-73(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF49193253
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G50080.12e-16ethylene response factor 110