PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_27758
Common NameKK1_028980
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family MYB
Protein Properties Length: 189aa    MW: 21801 Da    PI: 10.5837
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_27758genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding53.94.2e-17956148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+W++ Ed+ll  +v+q+G g W++++ + g++R++k+c+ rw++yl
    C.cajan_27758  9 KGAWSEVEDDLLRACVRQYGEGKWHLVPTRAGLNRCRKSCRQRWLNYL 56
                     79********************************************97 PP
2Myb_DNA-binding45.22.1e-1462106147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      rg + ++E ++ ++++k+lG++ W++Ia +++ gRt++++k++w++y
    C.cajan_27758  62 RGEFAEDEVDIMLRLHKLLGNR-WSLIAGRLP-GRTPNDVKNYWNTY 106
                      788999****************.*********.************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129424.036160IPR017930Myb domain
Gene3DG3DSA:1.10.10.602.2E-21759IPR009057Homeodomain-like
SuperFamilySSF466892.12E-277103IPR009057Homeodomain-like
SMARTSM007171.2E-14858IPR001005SANT/Myb domain
PfamPF002491.2E-15956IPR001005SANT/Myb domain
CDDcd001671.16E-101156No hitNo description
Gene3DG3DSA:1.10.10.604.3E-2260110IPR009057Homeodomain-like
SMARTSM007172.5E-1361109IPR001005SANT/Myb domain
PROSITE profilePS5129418.89961111IPR017930Myb domain
PfamPF002499.4E-1362106IPR001005SANT/Myb domain
CDDcd001671.77E-964107No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 189 aa     Download sequence    Send to blast
MEGSVCVRKG AWSEVEDDLL RACVRQYGEG KWHLVPTRAG LNRCRKSCRQ RWLNYLKPDI  60
KRGEFAEDEV DIMLRLHKLL GNRWSLIAGR LPGRTPNDVK NYWNTYIRRR ACSHKVVSNE  120
KVKTQEVIKP RAKTISRPSP WLSNTDPTTS PIPDISSPIA NNTFDPNDTK TSTLKRLVRK  180
PSKLNDYIT
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1a5j_A5e-2591117108B-MYB
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator, when associated with BHLH002/EGL3/MYC146, BHLH012/MYC1, or BHLH042/TT8. {ECO:0000269|PubMed:15361138}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_27758
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0902992e-95BT090299.1 Soybean clone JCVI-FLGm-4K7 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020233299.11e-138transcription factor MYB114
SwissprotQ9FNV91e-54MY113_ARATH; Transcription factor MYB113
TrEMBLA0A151S3A81e-137A0A151S3A8_CAJCA; Transcription factor MYB113 family
STRINGGLYMA19G02980.28e-79(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF3134817
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66370.11e-56myb domain protein 113
Publications ? help Back to Top
  1. Li T, et al.
    Jasmonic acid enhancement of anthocyanin accumulation is dependent on phytochrome A signaling pathway under far-red light in Arabidopsis.
    Biochem. Biophys. Res. Commun., 2014. 454(1): p. 78-83
    [PMID:25450360]
  2. Mondal SK,Roy S
    Genome-wide sequential, evolutionary, organizational and expression analyses of phenylpropanoid biosynthesis associated MYB domain transcription factors in Arabidopsis.
    J. Biomol. Struct. Dyn., 2018. 36(6): p. 1577-1601
    [PMID:28490275]