PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_27825
Common NameKK1_026453
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family DBB
Protein Properties Length: 192aa    MW: 20804.3 Da    PI: 5.2429
Description DBB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_27825genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-B_box19.22.5e-06544639
       zf-B_box  6 CpeHeekelqlfCedCqqllCedClleeHkg......Htv 39
                   C+ +++++   +C+++  +lC +C  + H+       H++
  C.cajan_27825  5 CDFCGDQRSMVYCRSDAACLCLSCDRNVHSAnalsrrHSR 44
                   *****************************65677777776 PP
2zf-B_box231.7e-074688440
       zf-B_box  4 rkCpeHeekelqlfCedCqqllCedClleeHkg.......Htvv 40
                     C++++++++   C + +  lC++C   +H g       H+++
  C.cajan_27825 46 LLCERCNSEPAFVRCVEEKISLCQNCDWLGH-GtstsssaHKRQ 88
                   57*****************************.547788888775 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS501199.684147IPR000315B-box-type zinc finger
SMARTSM003361.2E-8447IPR000315B-box-type zinc finger
CDDcd000212.14E-6447No hitNo description
PROSITE profilePS501198.8734390IPR000315B-box-type zinc finger
CDDcd000212.07E-44790No hitNo description
SMARTSM003361.64890IPR000315B-box-type zinc finger
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005622Cellular Componentintracellular
GO:0008270Molecular Functionzinc ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 192 aa     Download sequence    Send to blast
MGYLCDFCGD QRSMVYCRSD AACLCLSCDR NVHSANALSR RHSRTLLCER CNSEPAFVRC  60
VEEKISLCQN CDWLGHGTST SSSAHKRQAI NCYSGCPSAA ELSSIWSFVL DITSISESTC  120
EQELGLMSIN ENNNKRIGVP SENQNVSGSN QVTDLPALDK SLVGTSSMPE SSSKPQILDQ  180
PAGPANECLP KV
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_27825
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150380.0AP015038.1 Vigna angularis var. angularis DNA, chromosome 5, almost complete sequence, cultivar: Shumari.
GenBankBT0979890.0BT097989.1 Soybean clone JCVI-FLGm-22F8 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020231086.11e-138zinc finger protein CONSTANS-LIKE 9
RefseqXP_020231087.11e-138zinc finger protein CONSTANS-LIKE 9
SwissprotQ9LUA93e-71COL10_ARATH; Zinc finger protein CONSTANS-LIKE 10
TrEMBLA0A151SA291e-138A0A151SA29_CAJCA; Zinc finger protein CONSTANS-LIKE 10
STRINGGLYMA13G11592.11e-122(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF43623353
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48250.11e-73B-box type zinc finger protein with CCT domain
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]