PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_27872
Common NameKK1_029101
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family bHLH
Protein Properties Length: 425aa    MW: 47298.5 Da    PI: 6.5064
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_27872genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH383e-12353398655
                    HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
            HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                    +++Er RR ri +++ +L+ l Pk+    +k  s a++L +Av+YIk+Lq
  C.cajan_27872 353 SIAERVRRTRISERIKKLQGLFPKS----DKQTSTADMLDLAVDYIKDLQ 398
                    689*********************9....788*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088814.316347397IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474596.02E-15350413IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000834.43E-11351402No hitNo description
Gene3DG3DSA:4.10.280.101.5E-13352410IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000103.4E-9353398IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.1E-11353403IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 425 aa     Download sequence    Send to blast
MSVMYSPVLK YSDVEIQLRK NQEVDSSFGH PQQHCHQPNS GLLRYCSAPS SLLASLVDNT  60
IHEESFRSEN HQHYLPSTSS EMETMLSKLV SSNNEWSNSE GLQEEFGGKP VKQEIGESVP  120
QQNGYPYGES QLIYHQTQQI QGLPNGSSNA FDGSFGVVNS IQSKIGVRNC SNLLRQKSSP  180
ADFFSIENDL AALREVGSFK ANDVSNGQAN ASTSGLHGTL AFPSRPSSCL KRMPQIAENG  240
NEILEENCDQ SRNIENDNGS SRCYIPSFTS EFWDSSAFNA PKTESEDEIM FSTSNVLESQ  300
EADFSYQNLG LTHHLSLPSS STKMSSIEKF LQIQGSVPCK IRAKRGFATH PRSIAERVRR  360
TRISERIKKL QGLFPKSDKQ TSTADMLDLA VDYIKDLQQQ VKVLTDCKAK CKCTSNEKHY  420
TRTCS
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_27872
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020233358.10.0transcription factor bHLH130
TrEMBLA0A151S3410.0A0A151S341_CAJCA; Transcription factor bHLH130 family
STRINGGLYMA08G16190.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF40053359
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42280.12e-48bHLH family protein