PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_28168
Common NameKK1_030779
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family WRKY
Protein Properties Length: 248aa    MW: 28445.6 Da    PI: 4.9048
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_28168genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY95.15e-3047105259
                    --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
           WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                    +D ++WrKYGqK++kgs++pr+YY+C+++ gC++kk+ver+++d ++++itY+++Hnh+
  C.cajan_28168  47 SDFWSWRKYGQKPIKGSPYPRGYYKCSTSkGCSAKKQVERCRTDASMLIITYTSTHNHP 105
                    699***********************9988****************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.2E-3139107IPR003657WRKY domain
PROSITE profilePS5081131.86941107IPR003657WRKY domain
SuperFamilySSF1182905.89E-2644107IPR003657WRKY domain
SMARTSM007743.2E-3546106IPR003657WRKY domain
PfamPF031063.5E-2548105IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 248 aa     Download sequence    Send to blast
MDSNTKASPQ PDSESQTSKK RKMVEKTVVA VRIGENVGKL KNEGLPSDFW SWRKYGQKPI  60
KGSPYPRGYY KCSTSKGCSA KKQVERCRTD ASMLIITYTS THNHPCPTTT NSPQQPKESE  120
SKTIQDVSPT PKEEDQEKIE EQENNNKTND EITNEETFQY LQSPIRCSQD IIIEQEDPFK  180
LNTEKSHDRM DLLLEEEPLC YAQFKNLSAS KNEELDFFDE LEELPMSSSF LHFTRSIFSD  240
ERIPVAPS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5w3x_B7e-22471081780Disease resistance protein RRS1
5w3x_D7e-22471081780Disease resistance protein RRS1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_28168
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU0195560.0EU019556.1 Glycine max WRKY8 (WRKY8) mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020234857.10.0probable WRKY transcription factor 65
TrEMBLA0A151RYF80.0A0A151RYF8_CAJCA; Putative WRKY transcription factor 35
STRINGGLYMA19G40470.11e-156(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF97083241
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G34830.19e-37WRKY DNA-binding protein 35