PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_28230
Common NameKK1_033193
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family C2H2
Protein Properties Length: 176aa    MW: 19582.1 Da    PI: 4.7346
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_28230genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.88.4e-053153123
                   EEETTTTEEESSHHHHHHHHHHT CS
        zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                   y+C+ C + Fs+   L  H++ H
  C.cajan_28230 31 YECNFCRRGFSNAQALGGHMNIH 53
                   99*******************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.160.601.5E-52457IPR013087Zinc finger C2H2-type/integrase DNA-binding domain
SuperFamilySSF576673.47E-72858No hitNo description
PROSITE profilePS5015711.5933158IPR007087Zinc finger, C2H2
PROSITE patternPS0002803353IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003676Molecular Functionnucleic acid binding
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 176 aa     Download sequence    Send to blast
MESDLNHQAA PSENSTEGED QGASHVTSRS YECNFCRRGF SNAQALGGHM NIHRKDKAKL  60
KQQQQQQQQS SISNQTEPSL DKVIPQDQAM SGEANWNWNV SSQQEHASSR AIHTKQLPLF  120
AESPTSSETQ NSPLGQTTTE QTLLPRQDSS SEELDLELRL GPEPQDPSET GTRNFF
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_28230
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0925912e-52BT092591.1 Soybean clone JCVI-FLGm-11E20 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020236838.11e-128transcriptional regulator TAC1
TrEMBLA0A151RS131e-126A0A151RS13_CAJCA; Transcriptional regulator SUPERMAN
STRINGXP_007132037.11e-77(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF33353162
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G53820.11e-15C2H2 family protein