PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

C.cajan_28248

Common Name

KK1_028507

Organism

Cajanus cajan

Taxonomic ID

3821

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus

Family

GRAS

Protein Properties

Length: 54aa MW: 6324 Da PI: 4.4065

Description

GRAS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
C.cajan_28248	genome	IIPG	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GRAS	49.9	5.7e-16	2	53	242	293
GRAS 242 veqeadhnsesFlerflealeyysalfdsl.eaklpreseerikvErellgre 293 eqea+hn+++F +rf+++l+yys++fd++ e+++p+es+ r+kvE++ g++ C.cajan_28248 2 EEQEAEHNEARFEARFCNSLKYYSTVFDCIeESGVPQESSVRAKVEEM-YGKK 53 59**************************9999***********9.5555 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50985	9.491	1	54	IPR005202	Transcription factor GRAS
Pfam	PF03514	2.0E-13	2	53	IPR005202	Transcription factor GRAS

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated

Sequence ? help Back to Top
Protein Sequence Length: 54 aa Download sequence Send to blast
MEEQEAEHNE ARFEARFCNS LKYYSTVFDC IEESGVPQES SVRAKVEEMY GKKI

Cis-element ? help Back to Top
Source	Link
PlantRegMap	C.cajan_28248

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020227667.1	2e-23	scarecrow-like protein 28
Refseq	XP_020227668.1	2e-23	scarecrow-like protein 28
Refseq	XP_020227669.1	2e-23	scarecrow-like protein 28
TrEMBL	A0A151S4R4	3e-31	A0A151S4R4_CAJCA; Scarecrow-like protein 28
STRING	XP_007155560.1	2e-20	(Phaseolus vulgaris)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G63100.1	7e-13	GRAS family protein