PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_28936
Common NameKK1_029656
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family bHLH
Protein Properties Length: 349aa    MW: 39090.3 Da    PI: 4.8709
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_28936genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH32.61.5e-102733131055
                    HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
            HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                    r+RR+riN+++  L+ l+P+      +K++ +++Le+Av+Y+k Lq
  C.cajan_28936 273 RKRRERINERLRILQNLVPNG-----TKVDISTMLEEAVNYVKFLQ 313
                    9******************97.....8******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.288263312IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474592.49E-14263327IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.4E-12268322IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.6E-11269318IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.20E-11272317No hitNo description
PfamPF000108.4E-8273313IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 349 aa     Download sequence    Send to blast
MEPVGAFPDG EWDCFRRMFG SEEHDFTPQI PLLLHGDDEL NILTQPTFCA GAENIERMFY  60
SLDAHNHNSN SQYISQESSY SSNCSGDTVF IANPGSANYY FSYPDHVLAN NACEYSMDEK  120
IFASFVPSLA DIVTEESVKD IGSDILENSE CNHMEPIVFP TKQLQLKRKL DLPDEDKINN  180
RSENHKKKAR VSKDVRCMKN TWSKKNQKQG SNDDAEETNA GSDGHSSSSN MSEDDNKENS  240
GGATSGSKSL LNSNGKTRAS RGSATDPQSL YARKRRERIN ERLRILQNLV PNGTKVDIST  300
MLEEAVNYVK FLQLQIKLLS SDDLWMYAPL AYNGLDIGLN LNMKNSVPL
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_28936
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150361e-61AP015036.1 Vigna angularis var. angularis DNA, chromosome 3, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_029130304.10.0transcription factor bHLH84
TrEMBLA0A151S1Q00.0A0A151S1Q0_CAJCA; Transcription factor bHLH84
STRINGGLYMA17G35423.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF80733121
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G14760.16e-42bHLH family protein