PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_29005
Common NameKK1_026980
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family C2H2
Protein Properties Length: 189aa    MW: 21595.5 Da    PI: 5.7905
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_29005genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.30.000242951123
                   EEETTTTEEESSHHHHHHHHHHT CS
        zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                   y+C  C + F++   L  H++ H
  C.cajan_29005 29 YECVFCRRGFTTAQALGGHMNIH 51
                   99*******************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.160.606.3E-42755IPR013087Zinc finger C2H2-type/integrase DNA-binding domain
SuperFamilySSF576672.83E-62756No hitNo description
PROSITE profilePS5015710.972956IPR007087Zinc finger, C2H2
PROSITE patternPS0002803151IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003676Molecular Functionnucleic acid binding
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 189 aa     Download sequence    Send to blast
MEEDSKSSSE EIDRSSEHNN DEMGTGRSYE CVFCRRGFTT AQALGGHMNI HRKDRANKAK  60
PNFPPSSSTK VDESYHYADL GLYSASNPRG NYYSSLPDRE VDTNYNYCHQ LYFPSHTCGA  120
RSSPPSRVQY GEVLCVENQR DPQLLFGQDW RQRGLSLYTN PLCVHENKDK INNGEEDDLD  180
LELRLGHHP
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_29005
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020231521.21e-140transcriptional regulator SUPERMAN
TrEMBLA0A151S8R31e-140A0A151S8R3_CAJCA; Putative transcriptional regulator RABBIT EARS
STRINGXP_007144929.11e-104(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF16863073
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43540.12e-16C2H2 family protein