PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_29022
Common NameKK1_026998
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family ERF
Protein Properties Length: 134aa    MW: 15354.1 Da    PI: 5.3516
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_29022genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.93e-191566155
            AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                   ++y+GVr+++ +g+++AeIrdp     + +r++lg+f taeeAa+a+++a+ +++ 
  C.cajan_29022 15 PRYRGVRRRP-WGKFAAEIRDPAR---HgARVWLGTFLTAEEAARAYDRAAFEMRR 66
                   68********.**********943...24************************996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008474.1E-141566IPR001471AP2/ERF domain
CDDcd000181.88E-281575No hitNo description
SuperFamilySSF541711.11E-221675IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.103.9E-311676IPR001471AP2/ERF domain
SMARTSM003801.1E-331680IPR001471AP2/ERF domain
PROSITE profilePS5103224.4341674IPR001471AP2/ERF domain
PRINTSPR003673.5E-111728IPR001471AP2/ERF domain
PRINTSPR003673.5E-114056IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 134 aa     Download sequence    Send to blast
MEEESKEKKD TKEEPRYRGV RRRPWGKFAA EIRDPARHGA RVWLGTFLTA EEAARAYDRA  60
AFEMRRASAV LNFPNEYPSC SSMNSSSSLA PSSSTTVKND HGKQVIEFEC LDDQLLEDLL  120
DCDDYAYQKD LPKK
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A2e-331311511114Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_29022
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020231501.12e-96ethylene-responsive transcription factor ERF098
SwissprotQ9LTC52e-38ERF98_ARATH; Ethylene-responsive transcription factor ERF098
TrEMBLA0A151S8S34e-95A0A151S8S3_CAJCA; Ethylene-responsive transcription factor ERF098 family
STRINGXP_007144912.17e-53(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF27033215
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23230.17e-23ERF family protein
Publications ? help Back to Top
  1. Van den Broeck L, et al.
    From network to phenotype: the dynamic wiring of an Arabidopsis transcriptional network induced by osmotic stress.
    Mol. Syst. Biol., 2017. 13(12): p. 961
    [PMID:29269383]