PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_29540
Common NameKK1_027838
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family ERF
Protein Properties Length: 341aa    MW: 36684.9 Da    PI: 6.5045
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_29540genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.91.2e-182171256
            AP2  2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkklege 56
                   ++ GVr+++ +grWvAeI+d      ++ r +lg+f+tae+Aa+a+++a+++l+g+
  C.cajan_29540 21 RFVGVRQRP-SGRWVAEIKD----SlQKVRLWLGTFDTAEDAARAYDNAARALRGA 71
                   689******.7*********....4456*************************995 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008471.7E-122170IPR001471AP2/ERF domain
PROSITE profilePS5103220.4952178IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.106.6E-292178IPR001471AP2/ERF domain
CDDcd000181.13E-312178No hitNo description
SMARTSM003804.2E-362184IPR001471AP2/ERF domain
PRINTSPR003671.1E-72233IPR001471AP2/ERF domain
SuperFamilySSF541716.15E-202278IPR016177DNA-binding domain
PRINTSPR003671.1E-74460IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 341 aa     Download sequence    Send to blast
MGAVSDGSRS RKKSSSRGHH RFVGVRQRPS GRWVAEIKDS LQKVRLWLGT FDTAEDAARA  60
YDNAARALRG ANARTNFELP SSASSGGATK RGGGGSNFMP DRTEPFSFED VNEPDAEAEG  120
LLGALKAKLL DGKKDKFHFP FLANCASPVA QSGMVSRSSP INCSGKKELL PPCNNNPVHG  180
LMSSTTLTSN TCARSVVIPN HDHEGAVASS DRVNSHQLCQ TPPMASMAWP NEVACELPLP  240
SHMSQVPDNS LLASATLTWP LSEVIESTTV DMTCTDQGPS SSNRSGQLNM VTMQLPSVGG  300
AATESLWTLD QQQQFVQCEN NSWFSFNGSW DPLLYVPSEL V
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A7e-1519861280Ethylene-responsive transcription factor ERF096
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_29540
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150381e-152AP015038.1 Vigna angularis var. angularis DNA, chromosome 5, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020232312.10.0floral homeotic protein APETALA 2
TrEMBLA0A151S6F30.0A0A151S6F3_CAJCA; Ethylene-responsive transcription factor RAP2-11
STRINGXP_007148016.11e-170(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF113333035
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.11e-13related to AP2 11