PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_29734
Common NameKK1_030545
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family bHLH
Protein Properties Length: 320aa    MW: 35377.5 Da    PI: 6.5236
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_29734genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH32.61.4e-102392791055
                    HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
            HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                    r+RR+riN+++  L+ l+P+      +K++ +++Le+Av+Y+k Lq
  C.cajan_29734 239 RKRRERINERLRILQNLVPNG-----TKVDISTMLEEAVQYVKFLQ 279
                    9******************97.....8******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474592.22E-14227295IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.186229278IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.1E-12234288IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.5E-11235284IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.86E-11238283No hitNo description
PfamPF000107.2E-8239279IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009733Biological Processresponse to auxin
GO:0016049Biological Processcell growth
GO:0048766Biological Processroot hair initiation
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 320 aa     Download sequence    Send to blast
MEAADQISKE WSSLSGVYTA EEANFMNQLL GHCSVPEQLS ESFNLGTQSA FWPDHESTEN  60
NNTYFLPQVP NTNSVCFLQR SSSSADSIKY ISPATNVGNY SKDFSLQGND GKLMGGNTDL  120
ELGLDTRKEG LAEMNLQAHM ERQILDSESG KRSRSSIEVP KNKRNVKSKK NPKPASVSPN  180
PQGQTLSSCC SDDDSNASQE LHGGTSSSLN LKDSTALKLS GKSRSNREPA TDPQSAYARK  240
RRERINERLR ILQNLVPNGT KVDISTMLEE AVQYVKFLQL QIKLLSSDDL WMYAPIAYNG  300
MNIGLELNIN LTNQLKKCIA
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_29734
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150431e-45AP015043.1 Vigna angularis var. angularis DNA, chromosome 10, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020234679.10.0transcription factor bHLH84
TrEMBLA0A151RYY90.0A0A151RYY9_CAJCA; Transcription factor bHLH84
STRINGGLYMA20G26991.11e-107(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF80733121
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G14760.13e-46bHLH family protein