PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_29944
Common NameKK1_030960
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family WRKY
Protein Properties Length: 536aa    MW: 59680.2 Da    PI: 7.6047
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_29944genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY104.65.2e-33198255260
                    --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS
           WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 
                    dDg+nWrKYGqK+vkgse+prsYY+Ct+++C++kkkvers  d++++ei+Y+g+Hnh+k
  C.cajan_29944 198 DDGFNWRKYGQKQVKGSENPRSYYKCTHPNCSMKKKVERSL-DGQITEIVYKGHHNHPK 255
                    8****************************************.***************85 PP
2WRKY1016.8e-32365423159
                    ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
           WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                    ldDg++WrKYGqK+vkg++++rsYY+Ct +gC+v+k+ver+a+d k v++tYeg+Hnh+
  C.cajan_29944 365 LDDGFRWRKYGQKVVKGNPNARSYYKCTAPGCSVRKHVERAAHDIKSVITTYEGKHNHD 423
                    59********************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.806.5E-29188256IPR003657WRKY domain
SuperFamilySSF1182901.7E-25191256IPR003657WRKY domain
PROSITE profilePS5081123.468192256IPR003657WRKY domain
SMARTSM007741.5E-36197255IPR003657WRKY domain
PfamPF031062.0E-25198254IPR003657WRKY domain
Gene3DG3DSA:2.20.25.801.1E-35350425IPR003657WRKY domain
SuperFamilySSF1182901.57E-27357425IPR003657WRKY domain
PROSITE profilePS5081136.414360425IPR003657WRKY domain
SMARTSM007745.5E-36365424IPR003657WRKY domain
PfamPF031064.6E-24366423IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 536 aa     Download sequence    Send to blast
MTMNDHNNWG TSDINHDQVG LDVPKFKSVQ PPSLPISPSP ISPSSYLPFS TAFSPSEFFN  60
SPMFLPSPNI FASPTTEALV GQSFNWRNGS GEEQQRDKGD EKNYSDFSFQ PQIQSSSSMF  120
QGQEPLKKQD MWKFNEATKQ TEFSSEMTAT KSEYPLSQSF SLGMEAGKSE MQSNSVPRSG  180
NFDYINASQT VREQKRSDDG FNWRKYGQKQ VKGSENPRSY YKCTHPNCSM KKKVERSLDG  240
QITEIVYKGH HNHPKPQSRR TNSQSIHQPS SSCTNSGISD QSVVTLGNPQ MDHFSIQEDS  300
SASVGEEEFE QTSQTSYSGG DEDSLGPDAK RWKGDNENDG YSVSGSRTVR EPRVVVQTTS  360
EIDILDDGFR WRKYGQKVVK GNPNARSYYK CTAPGCSVRK HVERAAHDIK SVITTYEGKH  420
NHDVPAARGS ASYNMNRNSV NSNIPAPIRP SAVNCYSSSS SFTNSLCNNT RLPATGNQES  480
FSLDKFKNPG SFGYSALNKS VGSFTNHAQN SDAAYSRAKD ERKDDSFLQS FLSKDF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A1e-37189426878Probable WRKY transcription factor 4
2lex_A1e-37189426878Probable WRKY transcription factor 4
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator (PubMed:26025535). Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (PubMed:19199048, PubMed:26025535). Negative regulator of both gibberellic acid (GA) and abscisic acid (ABA) signaling in aleurone cells, probably by interfering with GAM1, via the specific repression of GA- and ABA-induced promoters (PubMed:15618416, PubMed:19199048, PubMed:26025535). {ECO:0000269|PubMed:15618416, ECO:0000269|PubMed:19199048, ECO:0000269|PubMed:26025535}.
UniProtTranscription repressor (By similarity). Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element. Negative regulator of both gibberellic acid (GA) and abscisic acid (ABA) signaling in aleurone cells, probably by interfering with GAM1, via the specific repression of GA- and ABA-induced promoters (By similarity). {ECO:0000250|UniProtKB:Q6IEQ7, ECO:0000250|UniProtKB:Q6QHD1}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_29944
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by abscisic acid (ABA) in aleurone cells, embryos, roots and leaves (PubMed:15618416, PubMed:19199048). Slightly down-regulated by gibberellic acid (GA) (PubMed:15618416). Accumulates in response to jasmonic acid (MeJA) (By similarity). {ECO:0000250|UniProtKB:Q6B6R4, ECO:0000269|PubMed:15618416, ECO:0000269|PubMed:19199048}.
UniProtINDUCTION: Induced by abscisic acid (ABA) in aleurone cells, embryos, roots and leaves (PubMed:25110688). Slightly down-regulated by gibberellic acid (GA) (By similarity). Accumulates in response to jasmonic acid (MeJA) (PubMed:16919842). {ECO:0000250|UniProtKB:Q6IEQ7, ECO:0000269|PubMed:16919842, ECO:0000269|PubMed:25110688}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020234989.10.0probable WRKY transcription factor 33 isoform X1
SwissprotQ6B6R41e-111WRK24_ORYSI; WRKY transcription factor WRKY24
SwissprotQ6IEQ71e-110WRK24_ORYSJ; WRKY transcription factor WRKY24
TrEMBLA0A151RY070.0A0A151RY07_CAJCA; Putative WRKY transcription factor 33
STRINGXP_007140176.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF107734114
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G03340.12e-87WRKY DNA-binding protein 3
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]
  2. Zhang ZL, et al.
    A negative regulator encoded by a rice WRKY gene represses both abscisic acid and gibberellins signaling in aleurone cells.
    Plant Mol. Biol., 2009. 70(1-2): p. 139-51
    [PMID:19199048]
  3. Basu S,Roychoudhury A
    Expression profiling of abiotic stress-inducible genes in response to multiple stresses in rice (Oryza sativa L.) varieties with contrasting level of stress tolerance.
    Biomed Res Int, 2014. 2014: p. 706890
    [PMID:25110688]
  4. Zhang L, et al.
    Three WRKY transcription factors additively repress abscisic acid and gibberellin signaling in aleurone cells.
    Plant Sci., 2015. 236: p. 214-22
    [PMID:26025535]