PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_31404
Common NameKK1_033650
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family DBB
Protein Properties Length: 186aa    MW: 21040.8 Da    PI: 6.816
Description DBB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_31404genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-B_box21.74.3e-07443538
       zf-B_box  5 kCpeHeekelqlfCedCqqllCedClleeHkg......Ht 38
                    C+ + ++++++fC  ++  lC+ C    H+       H+
  C.cajan_31404  4 QCDVCTKHHATFFCSADEAALCDACDHRVHHAntlaskHQ 43
                   7******9********************964446666666 PP
2zf-B_box216.8e-075796437
       zf-B_box  4 rkCpeHeekelqlfCedCqqllCedClleeHkg......H 37
                   + C+ ++e +   fC++++  lC++C + +H+       H
  C.cajan_31404 57 PLCDVCQERRGFVFCQEDRAILCRECDVPIHSAneltknH 96
                   78******99*********************655566666 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5011910.566147IPR000315B-box-type zinc finger
SMARTSM003365.4E-6347IPR000315B-box-type zinc finger
CDDcd000211.06E-4347No hitNo description
PfamPF006431.4E-5444IPR000315B-box-type zinc finger
SMARTSM003367.3E-1554101IPR000315B-box-type zinc finger
PROSITE profilePS501199.254101IPR000315B-box-type zinc finger
CDDcd000211.00E-757101No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005622Cellular Componentintracellular
GO:0008270Molecular Functionzinc ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 186 aa     Download sequence    Send to blast
MKIQCDVCTK HHATFFCSAD EAALCDACDH RVHHANTLAS KHQRFSLTYP STNHHLPLCD  60
VCQERRGFVF CQEDRAILCR ECDVPIHSAN ELTKNHNRFL LTGIKFTATA TATAMPYSQS  120
PPNKNHSAET NEQVGSSISE YLINTIPGMK FEDFLDSHTL PFPYSNVCSF TQFIISSHNC  180
FLVIWI
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that acts as positive regulator of seedling photomorphogenesis (PubMed:17965270). Acts downstream of COP1 and play an important role in early and long-term adjustment of the shade avoidance syndrome (SAS) responses in natural environments (PubMed:21070414). {ECO:0000269|PubMed:17965270, ECO:0000269|PubMed:21070414}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_31404
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020237328.11e-121B-box zinc finger protein 21
SwissprotQ9LQZ73e-54BBX21_ARATH; B-box zinc finger protein 21
TrEMBLA0A151RQM01e-137A0A151RQM0_CAJCA; Putative salt tolerance-like protein At1g75540 family
STRINGGLYMA06G02970.17e-80(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF14483494
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75540.11e-56salt tolerance homolog2
Publications ? help Back to Top
  1. Xu D, et al.
    BBX21, an Arabidopsis B-box protein, directly activates HY5 and is targeted by COP1 for 26S proteasome-mediated degradation.
    Proc. Natl. Acad. Sci. U.S.A., 2016. 113(27): p. 7655-60
    [PMID:27325768]
  2. Xu DB, et al.
    The G-Protein Ī² Subunit AGB1 Promotes Hypocotyl Elongation through Inhibiting Transcription Activation Function of BBX21 inĀ Arabidopsis.
    Mol Plant, 2017. 10(9): p. 1206-1223
    [PMID:28827171]
  3. Xu D,Jiang Y,Li J,Holm M,Deng XW
    The B-Box Domain Protein BBX21 Promotes Photomorphogenesis.
    Plant Physiol., 2018. 176(3): p. 2365-2375
    [PMID:29259103]
  4. Job N,Yadukrishnan P,Bursch K,Datta S,Johansson H
    Two B-Box Proteins Regulate Photomorphogenesis by Oppositely Modulating HY5 through their Diverse C-Terminal Domains.
    Plant Physiol., 2018. 176(4): p. 2963-2976
    [PMID:29439209]
  5. Crocco CD,Ocampo GG,Ploschuk EL,Mantese A,Botto JF
    Heterologous Expression of AtBBX21 Enhances the Rate of Photosynthesis and Alleviates Photoinhibition in Solanumtuberosum.
    Plant Physiol., 2018. 177(1): p. 369-380
    [PMID:29555784]
  6. Kang X, et al.
    HRB2 and BBX21 interaction modulates Arabidopsis ABI5 locus and stomatal aperture.
    Plant Cell Environ., 2018. 41(8): p. 1912-1925
    [PMID:29748960]