PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_31806
Common NameKK1_032492
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family TALE
Protein Properties Length: 576aa    MW: 63863.6 Da    PI: 7.0192
Description TALE family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_31806genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox28.72.3e-093854221954
                    HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
       Homeobox  19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 
                    Fe   ++yp+ +++  LAk++gL+ +qV++WF N R +
  C.cajan_31806 385 FEHflHPYPTDTDKLMLAKQTGLSRNQVSNWFINARVR 422
                    554459******************************88 PP
2BELL105.92.7e-34258324672
           BELL   6 qkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 
                     kkk +Ll++l+eV++rY+qy++q+++vi sFe vaglg+a+pY+slA +a+S+hFrcLk+ai++q+
  C.cajan_31806 258 GKKKCRLLTMLDEVCRRYRQYYQQMHAVITSFEYVAGLGNAAPYASLAINAMSKHFRCLKNAITDQL 324
                    68**************************************************************997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM005747.5E-48189322IPR006563POX domain
PfamPF075263.2E-37194321IPR006563POX domain
PROSITE profilePS5007112.131363426IPR001356Homeobox domain
SMARTSM003893.3E-10366430IPR001356Homeobox domain
CDDcd000869.75E-13366427No hitNo description
SuperFamilySSF466895.56E-17368432IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.609.6E-28369430IPR009057Homeodomain-like
PfamPF059201.4E-18383422IPR008422Homeobox KN domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 576 aa     Download sequence    Send to blast
MAEGFEHYHV PQQSRRDKLR VFPQSQPGFV ESSTTLHPTC PTLPSLYDPS LIPSDLLACG  60
TPQGHATKEE GSNLMMGFAE GGVVNGDAIQ FINSGSSNNP FLYHLQNLRE FGDSYNDGSE  120
MMVFKPEPLA LSLSSHSSNT HHPLELNLQR YGGVVYGDKG GGGGGCVVPG LVGGNCEVLR  180
NSVPLGPFTG YASILKGSRF LKPAHQLLEE LCDVGVRGVY ATEKIIAPDA SLMEPTHEGL  240
SASGIGGDDP LGEYGNEGKK KCRLLTMLDE VCRRYRQYYQ QMHAVITSFE YVAGLGNAAP  300
YASLAINAMS KHFRCLKNAI TDQLQFINKA PFQISNRKDE SPRFHNSDRG TYSQRPGFLE  360
HQQPVWRPQR GLPERAVSVL RAWLFEHFLH PYPTDTDKLM LAKQTGLSRN QVSNWFINAR  420
VRLWKPMVEE IHTLESQQGQ KRPHREEQSR KNLNDHLPSD NSLVTENPSA CMEKFHDDGP  480
YKHPRNELAN IQVRNNQEQL NQSNTSNQLV GVGVSNNGVS LTLGLHQNHG IGLSEPFSMS  540
AAQRFGVALQ HEGYAISGFE SHNRHFAGQL LHDFVG
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4xrm_A3e-16372430563Homeobox protein Meis2
4xrm_B3e-16372430563Homeobox protein Meis2
5bng_A3e-16372430159Homeobox protein Meis2
5bng_B3e-16372430159Homeobox protein Meis2
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_31806
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150371e-147AP015037.1 Vigna angularis var. angularis DNA, chromosome 4, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020236329.10.0BEL1-like homeodomain protein 9
TrEMBLA0A151RTR30.0A0A151RTR3_CAJCA; BEL1-like homeodomain protein 9
STRINGXP_007140461.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF28103373
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G02030.11e-106TALE family protein