PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_31832
Common NameKK1_031803
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family DBB
Protein Properties Length: 276aa    MW: 30182.9 Da    PI: 6.3349
Description DBB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_31832genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-B_box24.65.1e-08443538
       zf-B_box  5 kCpeHeekelqlfCedCqqllCedClleeHkg......Ht 38
                    C+ ++++e++lfC+ ++  lC+ C    H+       H+
  C.cajan_31832  4 QCDVCNKNEASLFCTADEAALCDACDHRVHHAnklaskHQ 43
                   7***************************964446666676 PP
2zf-B_box28.62.9e-095493239
       zf-B_box  2 eerkCpeHeekelqlfCedCqqllCedClleeHkg..Htv 39
                   + ++C+ ++ek++  fC++++  lC+dC +++H+   Ht+
  C.cajan_31832 54 QHPVCDICQEKRAFTFCQQDRAILCKDCDVSIHSAneHTL 93
                   6799*****************************6688987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5011911.064147IPR000315B-box-type zinc finger
CDDcd000213.98E-7347No hitNo description
PfamPF006435.1E-6443IPR000315B-box-type zinc finger
SMARTSM003368.9E-8447IPR000315B-box-type zinc finger
PROSITE profilePS5011910.11153100IPR000315B-box-type zinc finger
SMARTSM003368.1E-1253100IPR000315B-box-type zinc finger
PfamPF006431.7E-75494IPR000315B-box-type zinc finger
CDDcd000212.26E-856100No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009641Biological Processshade avoidance
GO:0005622Cellular Componentintracellular
GO:0008270Molecular Functionzinc ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 276 aa     Download sequence    Send to blast
MKIQCDVCNK NEASLFCTAD EAALCDACDH RVHHANKLAS KHQRFSLLRP SPSQHPVCDI  60
CQEKRAFTFC QQDRAILCKD CDVSIHSANE HTLKHDRFLL TAVKLSASAM LSSSEASSDS  120
NSTPSSLPLS SDVSRQTTLP PSSTVNKVAA IVGTASTDAI SSSISDYLIE TLPGWQVEDF  180
LDSYSVPFGF SKSDEVMTRF DGDVEGHVGS LSTESMGIWV PQAPPPLMCS SQMDRVIIGH  240
AETNNVKGSR SRLKDDNFTV PQISPQSNSK RARFLW
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that acts as positive regulator of seedling photomorphogenesis (PubMed:17965270). Acts downstream of COP1 and play an important role in early and long-term adjustment of the shade avoidance syndrome (SAS) responses in natural environments (PubMed:21070414). {ECO:0000269|PubMed:17965270, ECO:0000269|PubMed:21070414}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_31832
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0952811e-121BT095281.1 Soybean clone JCVI-FLGm-7G11 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020235807.10.0B-box zinc finger protein 21
SwissprotQ9LQZ71e-78BBX21_ARATH; B-box zinc finger protein 21
TrEMBLA0A151RVK60.0A0A151RVK6_CAJCA; Putative salt tolerance-like protein At1g75540 family
STRINGGLYMA17G37430.21e-152(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF14483494
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75540.16e-68salt tolerance homolog2
Publications ? help Back to Top
  1. Xu D, et al.
    BBX21, an Arabidopsis B-box protein, directly activates HY5 and is targeted by COP1 for 26S proteasome-mediated degradation.
    Proc. Natl. Acad. Sci. U.S.A., 2016. 113(27): p. 7655-60
    [PMID:27325768]
  2. Xu DB, et al.
    The G-Protein Ī² Subunit AGB1 Promotes Hypocotyl Elongation through Inhibiting Transcription Activation Function of BBX21 inĀ Arabidopsis.
    Mol Plant, 2017. 10(9): p. 1206-1223
    [PMID:28827171]
  3. Xu D,Jiang Y,Li J,Holm M,Deng XW
    The B-Box Domain Protein BBX21 Promotes Photomorphogenesis.
    Plant Physiol., 2018. 176(3): p. 2365-2375
    [PMID:29259103]
  4. Job N,Yadukrishnan P,Bursch K,Datta S,Johansson H
    Two B-Box Proteins Regulate Photomorphogenesis by Oppositely Modulating HY5 through their Diverse C-Terminal Domains.
    Plant Physiol., 2018. 176(4): p. 2963-2976
    [PMID:29439209]
  5. Crocco CD,Ocampo GG,Ploschuk EL,Mantese A,Botto JF
    Heterologous Expression of AtBBX21 Enhances the Rate of Photosynthesis and Alleviates Photoinhibition in Solanumtuberosum.
    Plant Physiol., 2018. 177(1): p. 369-380
    [PMID:29555784]
  6. Kang X, et al.
    HRB2 and BBX21 interaction modulates Arabidopsis ABI5 locus and stomatal aperture.
    Plant Cell Environ., 2018. 41(8): p. 1912-1925
    [PMID:29748960]