PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_32230
Common NameKK1_031633
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family bHLH
Protein Properties Length: 244aa    MW: 27759.7 Da    PI: 5.4716
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_32230genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH44.92.1e-145497755
                   HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
            HLH  7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55
                     Er+RR+++N++++ Lr+++P+ +      K++Ka+i + A+eYI++L+
  C.cajan_32230 54 VSERNRRKKLNERLFALRSVVPNiS------KMDKASIIKDAIEYIQHLH 97
                   57*********************66......*****************95 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088816.8374796IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.7E-1848113IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.96E-1350101No hitNo description
Gene3DG3DSA:4.10.280.102.4E-1753112IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003538.2E-1653102IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000106.0E-125496IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 244 aa     Download sequence    Send to blast
MDNIGEEYKH YWETNMFLQT QELDSWGLDE ALSGYYDSSS PDGAASSAAS KNIVSERNRR  60
KKLNERLFAL RSVVPNISKM DKASIIKDAI EYIQHLHEQE KIIQAEIMEL ESGMPKKSSP  120
SYDFELEQLP VVLRSKKKRT ENLYDSITSR NSPIELLNLQ VTYMGEKTVV VSLTCSKRTD  180
TMVKLCEVFE SLRLKIITAN ITSFSGGLLK TVFIEANEEE KDHLKIKIKT AIEALNDPQS  240
PMSI
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_32230
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0966900.0BT096690.1 Soybean clone JCVI-FLGm-21E7 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020235664.10.0transcription factor bHLH35
SwissprotQ2HIV91e-94BH035_ARATH; Transcription factor bHLH35
TrEMBLA0A151RW061e-180A0A151RW06_CAJCA; Transcription factor bHLH35
STRINGGLYMA09G06770.11e-164(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF33893369
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57150.11e-87bHLH family protein