PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_32586
Common NameKK1_033761
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family WOX
Protein Properties Length: 67aa    MW: 8066.33 Da    PI: 11.2242
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_32586genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox24.16.1e-0822483157
                   HHHHHHCTS-HHHHHHHHHHHHHHHHC CS
       Homeobox 31 eeLAkklgLterqVkvWFqNrRakekk 57
                   ++L+   +++ ++ ++WFqN++ak+++
  C.cajan_32586 22 THLSFYGKIQGKNLFYWFQNHKAKDRQ 48
                   5566666999***************96 PP
2Wus_type_Homeobox491.5e-1617493264
  Wus_type_Homeobox 32 iqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64
                       i++ +++L+ yGki++kN fyWFQN+ka++rqk
      C.cajan_32586 17 INNKKTHLSFYGKIQGKNLFYWFQNHKAKDRQK 49
                       5566799*************************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF000461.9E-52248IPR001356Homeobox domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 67 aa     Download sequence    Send to blast
MITSIDNKHG KQKGILINNK KTHLSFYGKI QGKNLFYWFQ NHKAKDRQKL RRKLTNQLQL  60
QQQQQVD
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor required to initiate organ founder cells in a lateral domain of shoot meristems. Involved in the lateral sepal axis-dependent development of flowers, probably by regulating the proliferation of L1 cells at the lateral region of flower primordia. Required for the formation of the margin cells of the first and second whorl organs. {ECO:0000269|PubMed:11751640, ECO:0000269|PubMed:15169755}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_32586
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022756585.12e-17WUSCHEL-related homeobox 3-like
SwissprotQ9SIB42e-14WOX3_ARATH; WUSCHEL-related homeobox 3
TrEMBLA0A151RQ841e-39A0A151RQ84_CAJCA; WUSCHEL-related homeobox 3
STRINGXP_004148244.11e-15(Cucumis sativus)
STRINGXP_004168470.11e-15(Cucumis sativus)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF106322940
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28610.12e-17WOX family protein
Publications ? help Back to Top
  1. Chandler JW,Werr W
    Arabidopsis floral phytomer development: auxin response relative to biphasic modes of organ initiation.
    J. Exp. Bot., 2014. 65(12): p. 3097-110
    [PMID:24744428]
  2. Niu L, et al.
    LOOSE FLOWER, a WUSCHEL-like Homeobox gene, is required for lateral fusion of floral organs in Medicago truncatula.
    Plant J., 2015. 81(3): p. 480-92
    [PMID:25492397]
  3. Alvarez JP,Furumizu C,Efroni I,Eshed Y,Bowman JL
    Active suppression of a leaf meristem orchestrates determinate leaf growth.
    Elife, 2017.
    [PMID:27710768]
  4. Guan C, et al.
    Spatial Auxin Signaling Controls Leaf Flattening in Arabidopsis.
    Curr. Biol., 2017. 27(19): p. 2940-2950.e4
    [PMID:28943086]