PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_33067
Common NameKK1_037392
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family B3
Protein Properties Length: 170aa    MW: 20117.1 Da    PI: 10.1946
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_33067genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B360.33.4e-194801698
                   EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
             B3 16 lvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98
                    ++p kf++++g+  + s t+ l+ ++g +W+v+l  +k++++++++kGWkeFv  + L  g  +vF++dg+  f  +v +++
  C.cajan_33067  4 QRIPAKFVRKYGK--HLSNTVFLKLPNGAEWRVNL--EKRDDSVWFQKGWKEFVAYHSLAHGNLLVFRYDGTPHF--HVLICD 80
                   68*********94..5999****************..*********************************99999..999997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5086314.607182IPR003340B3 DNA binding domain
Gene3DG3DSA:2.40.330.101.4E-23382IPR015300DNA-binding pseudobarrel domain
SMARTSM010191.3E-10382IPR003340B3 DNA binding domain
PfamPF023621.2E-15380IPR003340B3 DNA binding domain
SuperFamilySSF1019361.8E-22481IPR015300DNA-binding pseudobarrel domain
CDDcd100171.78E-17580No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 170 aa     Download sequence    Send to blast
SAQQRIPAKF VRKYGKHLSN TVFLKLPNGA EWRVNLEKRD DSVWFQKGWK EFVAYHSLAH  60
GNLLVFRYDG TPHFHVLICD MSATEIEYPV SKPNHKRAKI SSQEIQPRKT RRTNRKDEKS  120
NSNLQDVVAF DQKVKNHKGK FLESYFLIYL FVRFLAIELE GYKEFCFVYV
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_33067
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_014634074.14e-65B3 domain-containing protein At1g49475-like
TrEMBLA0A151RF191e-124A0A151RF19_CAJCA; B3 domain-containing protein At1g49475 family (Fragment)
STRINGGLYMA08G44640.11e-62(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF9834369
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49475.13e-24B3 family protein