PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

C.cajan_33271

Common Name

KK1_035519

Organism

Cajanus cajan

Taxonomic ID

3821

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus

Family

Dof

Protein Properties

Length: 248aa MW: 26667.5 Da PI: 9.1792

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
C.cajan_33271	genome	IIPG	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	46	1.1e-14	33	61	36	63
zf-Dof 36 C.rryWtkGGalrnvPvGggrrknkksss 63 C rryWt+GG+lrn+PvGgg+rknk+sss C.cajan_33271 33 CpRRYWTEGGSLRNIPVGGGSRKNKRSSS 61 549**********************9875 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD007478	2.0E-7	19	52	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	6.3E-9	33	58	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 248 aa Download sequence Send to blast
MVVKPIEDIV VTNTCPKGVE KKARPQKEQA LNCPRRYWTE GGSLRNIPVG GGSRKNKRSS 60 SSSTPNNKKL NVPDLVISPP TLSHTQNPKN NNNVHQGQDL NLAFPATVPD FRNISELVQQ 120 NNNNNSSNSN MSASVSASSS SSTTTTTPAT TASHLSAMEL LSGITSSSTA DPNSVYTCGF 180 PLQDFKPTLN FSLDGYASLH NVQSGRLLFP FEDLKQVSNT TTTTTPMDQK QQGDSTGYWT 240 GMLGGGSW

Cis-element ? help Back to Top
Source	Link
PlantRegMap	C.cajan_33271

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020238895.1	1e-132	dof zinc finger protein DOF4.6 isoform X1
TrEMBL	A0A151RKH8	0.0	A0A151RKH8_CAJCA; Dof zinc finger protein DOF4.6
STRING	GLYMA20G35910.1	1e-109	(Glycine max)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF674	34	137

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46590.2	1e-14	Dof family protein