PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_33289
Common NameKK1_036091
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family MYB_related
Protein Properties Length: 654aa    MW: 73951.9 Da    PI: 8.5999
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_33289genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding31.34.8e-10474513344
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrw 44 
                       WT eE   +++av  +G++ ++ Ia+++g +++  qck ++
    C.cajan_33289 474 DWTNEEKATFLQAVSSFGKD-FTMIAKHVG-TKSKDQCKIFF 513
                      6*****************99.*********.********776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466898.97E-14243303IPR009057Homeodomain-like
PROSITE profilePS5129315.565255306IPR017884SANT domain
SMARTSM007171.5E-7256304IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.608.3E-4259300IPR009057Homeodomain-like
PROSITE profilePS5129315.512470521IPR017884SANT domain
SMARTSM007178.3E-8471519IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.601.8E-7472513IPR009057Homeodomain-like
SuperFamilySSF466892.32E-11473520IPR009057Homeodomain-like
PfamPF002497.3E-9474513IPR001005SANT/Myb domain
CDDcd001676.50E-7475515No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 654 aa     Download sequence    Send to blast
MNKLVIWKAF VTNVLEVTET EIDSLENELK SLQSKSRDRL PCSVATSSLL VCHSAIFYFG  60
TENTLYDTII SSNRESAKRA SEAFAMLLPK ECGKISNVGV CSSSLSNNDA FIKEKLAERK  120
RFERFKEMVL TIKYKAFNHL WEKDLCLRST RKCPSTSHSN LELDLQTISK GCKKNRSSMR  180
HRFPFPGGKQ LSLVPTSEMI SYTSQLLSEI SHHEVNENIL KMPTLILDKR DKIFSMFTSS  240
NGLVDDPLTI EKERSMINPW TFEERNIFLE KFVAFGKDFR KISSFLDHKT TADCVEFYYK  300
NHKSDFFEKT KKTKASKYRK LRTTKNSLMA SSKKRNRKEN VDSLQILNEA PVMARRTQGN  360
RRTRPRKPRL WKGCDNMKKL TGGDRITERS SLDVLQDERE RVAADALVSL CDSRSSSKAV  420
ITRSVDPVEA IRDKPCLKMR IQCQQPVMSQ PDVTQDIDHG TRYDEGCGEI DDSDWTNEEK  480
ATFLQAVSSF GKDFTMIAKH VGTKSKDQCK IFFIKGKKWP GLNLMHHKPD YNVSPVNDLN  540
SGRNDKDDGC VVVADTIIGS DKSGTKTNGD EPSSSMNLND DESKPAEAEN LSTDINESKE  600
LEAEVDHEDG NMASNSCALN SESASEKTPR NVVLKLFGKT ITIPLSSQKS DLVS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4a69_C7e-13222308994NUCLEAR RECEPTOR COREPRESSOR 2
4a69_D7e-13222308994NUCLEAR RECEPTOR COREPRESSOR 2
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1354367RRTQGNRRTRPRKP
2360366RRTRPRK
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_33289
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020239389.10.0uncharacterized protein LOC109818354
TrEMBLA0A151RIZ60.0A0A151RIZ6_CAJCA; Nuclear receptor corepressor 2
STRINGXP_004489929.10.0(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF49863352
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G52250.12e-76MYB family protein