PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_33777
Common NameKK1_034481
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family bHLH
Protein Properties Length: 275aa    MW: 31562.8 Da    PI: 4.5963
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_33777genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH24.83.9e-08148191755
                    HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
            HLH   7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                    ++ r RR++i ++ +eL +l+P       +K++ ae+L  A +Y+++Lq
  C.cajan_33777 148 IAARERRRKITEKTQELGKLVPGG-----PKMNTAEMLHAAAKYVNYLQ 191
                    56799*****************95.....5******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474594.58E-12139201IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088812.271141190IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003535.4E-10147196IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000836.63E-8147195No hitNo description
Gene3DG3DSA:4.10.280.102.2E-11148203IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000109.9E-6149191IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 275 aa     Download sequence    Send to blast
MPEEVSAPNL NHFFPYSDES FFLSNPLFNN YLDPTGDFVF PSEIYAPYDP IIPLTHRDIF  60
PTHEDYNLLP CPKPQKYSYE AEPQELTTPS VPSTFLEGFF VPYDVCSSRQ GEEQQHELFH  120
KVPQHDTCVD LPRCEKKDKE RTISPQSIAA RERRRKITEK TQELGKLVPG GPKMNTAEML  180
HAAAKYVNYL QAQVRMLELM KSLEEEKAAP PSEILHDLVV SPFVQEKLYT EELCFVPKEI  240
VTTLTNDEDV KSSPTIVEDL KQLIGIDIET KVKQE
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_33777
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150421e-57AP015042.1 Vigna angularis var. angularis DNA, chromosome 9, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020238020.10.0transcription factor bHLH53
TrEMBLA0A151RNC20.0A0A151RNC2_CAJCA; Transcription factor bHLH53
STRINGGLYMA08G17747.11e-130(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF34593065
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30670.11e-28bHLH family protein