PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_33967
Common NameKK1_034857
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family TALE
Protein Properties Length: 578aa    MW: 64137.4 Da    PI: 6.0657
Description TALE family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_33967genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox28.82.1e-093774141954
                    HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
       Homeobox  19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 
                    Fe   ++yp+ +e+  LA+++gLt +qV +WF N R +
  C.cajan_33967 377 FEHflHPYPKDSEKVMLARQTGLTRNQVANWFINARVR 414
                    665559******************************88 PP
2BELL126.41e-40248319172
           BELL   1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 
                    erq+l  kk+kLls+l+eVdkrY+qy++q+q+v+ssF++vag+g+a+pYt+lAl++iSrhFrcL+dai++qi
  C.cajan_33967 248 ERQNLLDKKTKLLSMLDEVDKRYRQYCHQMQIVVSSFDMVAGCGAAEPYTELALRTISRHFRCLRDAISGQI 319
                    6899999****************************************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM005746.4E-63188317IPR006563POX domain
PfamPF075268.5E-49194316IPR006563POX domain
PROSITE profilePS5007112.39355418IPR001356Homeobox domain
SMARTSM003894.8E-9358422IPR001356Homeobox domain
CDDcd000863.83E-12358419No hitNo description
SuperFamilySSF466892.78E-17359425IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.609.9E-28361424IPR009057Homeodomain-like
PfamPF059204.5E-17375414IPR008422Homeobox KN domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 578 aa     Download sequence    Send to blast
MYPNQAFSSG SYAEMLSGNP LLPHNYSESV GGQNELKFIT SMADTVTMQP IDGHSNAGDP  60
ACNSFANAGD SHSHVIPRTT QLGLVESEQN VQNQGLSLSL GSVMPSMQSV PNFSYQYPST  120
GFSSLMTASV PNLKGTSSKD DEASLQREFR TAECMASLAS GGGFHKREGL YSPHPSMCLS  180
EGQSDGSQGF SNTVLNSQYL KAAQELLDEI VNVRKALKQN GLEKQQSFRD NGPNGSAANS  240
SSELSPAERQ NLLDKKTKLL SMLDEVDKRY RQYCHQMQIV VSSFDMVAGC GAAEPYTELA  300
LRTISRHFRC LRDAISGQIQ ATQRSLGEQE GIPRLRYVDQ QLRQQKALQQ LGVMRQAWRP  360
QRGLPETSVS ILRAWLFEHF LHPYPKDSEK VMLARQTGLT RNQVANWFIN ARVRLWKPMV  420
EEMYKEEFGD SEMSSNLLSS ENALKAPRDD VQASDNKREE SQDNLVTLDS VQHHASEFNM  480
NNTNPYYGDG CIMTSTAATY DLSELGNIGV GGHVSLALEL RNCESEGFGT NNDDMHKRRK  540
KTTVASTPEA DLLDYHFTDT GKQQNKFGNP HLLHEFVV
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4xrm_A2e-16364422563Homeobox protein Meis2
4xrm_B2e-16364422563Homeobox protein Meis2
4xrs_A1e-16364421158Homeobox protein Meis1
4xrs_B1e-16364421158Homeobox protein Meis1
5bng_A2e-16364422159Homeobox protein Meis2
5bng_B2e-16364422159Homeobox protein Meis2
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_33967
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150361e-170AP015036.1 Vigna angularis var. angularis DNA, chromosome 3, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020238313.10.0BEL1-like homeodomain protein 7
RefseqXP_020238314.10.0BEL1-like homeodomain protein 7
RefseqXP_020238315.10.0BEL1-like homeodomain protein 7
RefseqXP_020238316.10.0BEL1-like homeodomain protein 7
RefseqXP_020238317.10.0BEL1-like homeodomain protein 7
SwissprotQ9SIW11e-118BLH7_ARATH; BEL1-like homeodomain protein 7
TrEMBLA0A151RM980.0A0A151RM98_CAJCA; BEL1-like homeodomain protein 7
STRINGGLYMA14G07710.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF21463179
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G16400.11e-111BEL1-like homeodomain 7
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]