PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_34129
Common NameKK1_035562
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family bHLH
Protein Properties Length: 268aa    MW: 28677.8 Da    PI: 7.7226
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_34129genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.38.8e-11151198455
                    HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
            HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                    +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++YI+sLq
  C.cajan_34129 151 SHSLAERARREKISERMKILQDLVPGC----NKVIGKALVLDEIINYIQSLQ 198
                    8*************************9....677*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000838.03E-11145202No hitNo description
SuperFamilySSF474599.55E-18145214IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.828147197IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.104.0E-18147216IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000103.8E-8151198IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.0E-10153203IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0048446Biological Processpetal morphogenesis
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 268 aa     Download sequence    Send to blast
MDPGAMMNEG SFANNGTANT APYSLAEIWQ FPQPINGAGG LGLRTPQFGH GPGPGPFADF  60
AAHGLGPSNS TRKRRDSEDD STKGVSTSNA VNEGDGKRVK ATGNSGGDGN NKGEGEVSSG  120
KPAEQSAKPP SEPPKQDYIH VRARRGQATD SHSLAERARR EKISERMKIL QDLVPGCNKV  180
IGKALVLDEI INYIQSLQRQ VEFLSMKLEA VNSRLNSGIE AFPPKDFGQQ TFDPAGLPFG  240
SQAPREYSRG SSPEWLHMQV GGGFERTT
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that may regulate jasmonate-regulated genes. {ECO:0000250|UniProtKB:Q69WS3}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00207DAPTransfer from AT1G59640Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_34129
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020238985.10.0transcription factor BHLH089 isoform X2
SwissprotQ84T082e-83BH089_ORYSJ; Transcription factor BHLH089
TrEMBLA0A151RKA00.0A0A151RKA0_CAJCA; Transcription factor BPE
STRINGXP_007153872.11e-171(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF117134105
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G59640.14e-94BIG PETAL P
Publications ? help Back to Top
  1. Yilmaz A, et al.
    GRASSIUS: a platform for comparative regulatory genomics across the grasses.
    Plant Physiol., 2009. 149(1): p. 171-80
    [PMID:18987217]