PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_34204
Common NameKK1_030134
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family bHLH
Protein Properties Length: 530aa    MW: 57697.1 Da    PI: 6.9008
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_34204genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH28.23.5e-09325372455
                    HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
            HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                    +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++Y++sLq
  C.cajan_34204 325 SHSLAERVRREKISERMKLLQDLVPGC----NKVTGKALMLDEIINYVQSLQ 372
                    8*************************9....677*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000831.25E-10319376No hitNo description
SuperFamilySSF474597.07E-17319390IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.663321371IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.2E-16321389IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.9E-6325372IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.6E-10327377IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 530 aa     Download sequence    Send to blast
MENQFFLNAG VPPQLHFEPS APPPCPPSWQ SLSSAMDVQV TVLNCSTEQT QDCFYTPTWD  60
KSTDHGLQFD SALSSMVSSP AASNSNITNT SCYSTPLSSP PKVNMNKIPS GLNHLVKEGM  120
PLNSSVAEFS ADPGFAERAA KFSCFGSRSF NGRTTQLGLN TNAELAQRSS PLVENGKLPR  180
VSSSPSLKVP GSNKNSPLQD LMEVANSQEE STISEQTPNG DTGVKPSPYI NSRKRKGPSK  240
GKAKETSTST NPPTAAEASE DSNAKRSKPN EREGNENGQV KAEEESKRGA SNANDEKQNK  300
SNAKPPEPPK DYIHVRARRG QATDSHSLAE RVRREKISER MKLLQDLVPG CNKVTGKALM  360
LDEIINYVQS LQRQVEFLSM KLASVNTRLD FSIESLISKD IFQSNNSLAH PIFPIDSSAP  420
AFYGQHPQPN PAIHNNIPNG TVTHTSVDPL DTGLCQNLGM QLPHLSGFNE GSSQYPITFS  480
EDDLHTIVQM GFGQTANRKT PLQSQSFNGI KQRENMLYVN DTSFSLGPTN
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00660PBMTransfer from Pp3c6_9520Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_34204
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKT0311130.0KT031113.1 Glycine max clone HN_CCL_101 bHLH transcription factor (Glyma08g46040.1) mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020234258.10.0transcription factor bHLH62
TrEMBLA0A151S0630.0A0A151S063_CAJCA; Transcription factor bHLH62
STRINGGLYMA18G32560.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF25303480
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G07340.11e-102bHLH family protein