PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_34336
Common NameKK1_035764
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family bHLH
Protein Properties Length: 206aa    MW: 22885.2 Da    PI: 8.4736
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_34336genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH37.15.6e-124590454
                   HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
            HLH  4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                    h ++ErrRR+++ ++f  L   +P +      K +Ka++L+ A++Y+k+L
  C.cajan_34336 45 DHIMAERRRRQELTERFIALSATIPGL-----NKTDKASVLRAAIDYVKEL 90
                   699***********************8.....6****************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474594.06E-1739101IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000836.61E-123995No hitNo description
PROSITE profilePS5088815.5554190IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.108.7E-1745102IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.7E-94590IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003536.2E-154796IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 206 aa     Download sequence    Send to blast
MVPATPEPSS NNSTTLPAKR ALGPEAVARP NQGAKKVRSS SQTVDHIMAE RRRRQELTER  60
FIALSATIPG LNKTDKASVL RAAIDYVKEL KEQIQELEKQ DKTRSLLKKR DPSNIPEIEA  120
RVLGKEVLIE IHCEKQNGIQ FILLDHLENL HLTVTASSVL PFGNSALSIT ITAQMGEAYK  180
MTVDDLVKNI RQVLPDSHVL SDSDPY
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_34336
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By ethylene (ACC) and jasmonic acid (JA) treatments. {ECO:0000269|PubMed:12679534}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020239140.11e-149transcription factor bHLH18
SwissprotQ9T0727e-35BH025_ARATH; Transcription factor bHLH25
TrEMBLA0A151RJU31e-149A0A151RJU3_CAJCA; Transcription factor bHLH25
STRINGGLYMA07G03060.11e-107(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF131101230
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22750.21e-32bHLH family protein