PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_34606
Common NameKK1_032989
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family MYB_related
Protein Properties Length: 228aa    MW: 26476.8 Da    PI: 7.7229
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_34606genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding39.51.3e-1266108447
                      S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      W+++E+ l++ + + +G+g+Wk Iar++g ++ + q+ s+ qk+
    C.cajan_34606  66 WSKDEHRLFLVGLEIFGKGNWKNIARYIG-TKKASQVSSHAQKF 108
                      *****************************.************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129413.20458113IPR017930Myb domain
SuperFamilySSF466891.57E-1459113IPR009057Homeodomain-like
TIGRFAMsTIGR015579.4E-1361111IPR006447Myb domain, plants
SMARTSM007172.1E-862111IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.603.4E-864113IPR009057Homeodomain-like
CDDcd001674.74E-1066109No hitNo description
PfamPF002497.2E-1066107IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 228 aa     Download sequence    Send to blast
MDEFWSYLDH SPPMNEFSPM LMQDNTEKLI VGETSNVIHT ESDIIKLLND SNNSSISIPR  60
KKYIHWSKDE HRLFLVGLEI FGKGNWKNIA RYIGTKKASQ VSSHAQKFFN RLNASKESKK  120
RKSIHDITLQ DIDTRIPQHI YESNGVLPTP NFAMQAQNMQ ETQYVSQDSQ LNPPSNVHHP  180
MEEYKYFNNK EPQHIEHHNS ISCLTLAVQQ FHKCNKDNYC CPSTSKNI
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_34606
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A151RSE71e-170A0A151RSE7_CAJCA; Myb-like protein J
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF13860414
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G08520.16e-24MYB family protein