PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_34706
Common NameKK1_033739
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family MYB_related
Protein Properties Length: 92aa    MW: 10822.8 Da    PI: 4.3842
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_34706genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding24.46.8e-081558344
                     SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrw 44
                      WT    +++ +a +++  +   +W  Ia+++g +++ +++k ++
    C.cajan_34706 15 TWTRLQNKQFERALALYDEDtpdRWQNIAKEVG-NKSVEEVKRHY 58
                     699999************99*************.**********9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS512939.571166IPR017884SANT domain
SMARTSM007173.7E-81264IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.603.6E-91368IPR009057Homeodomain-like
CDDcd001677.68E-71558No hitNo description
PfamPF002491.8E-61558IPR001005SANT/Myb domain
SuperFamilySSF466894.91E-121669IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 92 aa     Download sequence    Send to blast
MASNSMNNNK EHFPTWTRLQ NKQFERALAL YDEDTPDRWQ NIAKEVGNKS VEEVKRHYAI  60
LLEDLSSIES GHVPIPDYDF SENMDDDDHV ER
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2cjj_A2e-2416881184RADIALIS
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor. {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_34706
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020237378.11e-63protein RADIALIS-like 6
SwissprotQ1A1733e-30RADL6_ARATH; Protein RADIALIS-like 6
TrEMBLA0A151RQD52e-62A0A151RQD5_CAJCA; Uncharacterized protein
STRINGGLYMA11G34180.23e-45(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF15434280
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75250.21e-32RAD-like 6