PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_34795
Common NameKK1_034269
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family MYB
Protein Properties Length: 232aa    MW: 26519.9 Da    PI: 7.9487
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_34795genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding54.82.2e-171461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g WT+eEd++l d ++ +G ++W++ ++  g+ R++k+c++rw +yl
    C.cajan_34795 14 KGTWTPEEDQILMDHINTHGHKNWRALPKLAGLLRCGKSCRLRWMNYL 61
                     799*****************************99************97 PP
2Myb_DNA-binding57.23.9e-1867112148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rg++T+eE+el++++++ lG++ W++Ia+t++ gRt++++k+ w+++l
    C.cajan_34795  67 RGNFTKEEEELIIQLHETLGNR-WSAIAATLP-GRTDNEIKNVWHTHL 112
                      89********************.*********.************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129416.407961IPR017930Myb domain
SuperFamilySSF466897.91E-3110108IPR009057Homeodomain-like
SMARTSM007171.0E-131363IPR001005SANT/Myb domain
PfamPF002496.8E-161461IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.601.1E-241568IPR009057Homeodomain-like
CDDcd001679.78E-111661No hitNo description
PROSITE profilePS5129425.762116IPR017930Myb domain
SMARTSM007177.6E-1566114IPR001005SANT/Myb domain
PfamPF002498.9E-1667112IPR001005SANT/Myb domain
CDDcd001676.71E-1169112No hitNo description
Gene3DG3DSA:1.10.10.605.1E-2769116IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 232 aa     Download sequence    Send to blast
MGRAPCCEKM GLKKGTWTPE EDQILMDHIN THGHKNWRAL PKLAGLLRCG KSCRLRWMNY  60
LRPEIKRGNF TKEEEELIIQ LHETLGNRWS AIAATLPGRT DNEIKNVWHT HLKKRLPQDT  120
KTKHKKRSAK QNSSLNPQIT EEKEKPLLSP PHCVSSDVST LTTTATSDTN DAIHVPINRG  180
AAESLDDDFW SQVLSSYNSD ETTSFPPNSS SVYHNVDFWY DVYMGAQDLP YF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1h8a_C8e-291211625128MYB TRANSFORMING PROTEIN
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that regulates freezing tolerance by affecting expression of CBF genes. {ECO:0000269|PubMed:24415840}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_34795
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by salicylic acid (SA), jasmonic acid (JA), salt (NaCl), ethylene and auxin (IAA) (PubMed:16463103). Down-regulated by cold treatment (PubMed:24415840). {ECO:0000269|PubMed:16463103, ECO:0000269|PubMed:24415840}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020237865.11e-176transcription factor MYB4
SwissprotQ9SJX82e-77MYB14_ARATH; Transcription factor MYB14
TrEMBLA0A151RNZ01e-174A0A151RNZ0_CAJCA; Myb-related protein Myb4
STRINGXP_007144899.12e-98(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF3134817
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31180.13e-77myb domain protein 14
Publications ? help Back to Top
  1. Chen Y, et al.
    AtMYB14 Regulates Cold Tolerance in Arabidopsis.
    Plant Mol. Biol. Rep., 2013. 31: p. 87-97
    [PMID:24415840]