PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_34930
Common NameKK1_039027
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family bHLH
Protein Properties Length: 284aa    MW: 31726.6 Da    PI: 5.224
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_34930genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH29.61.2e-091362154
                   CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
            HLH  1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                   r++ +  rE+ RRdr+N+ f eL  +l ++     +K++Ka+iL  +++ +k+L
  C.cajan_34930 13 RKTLKADREKLRRDRLNEQFVELGNILDPD----RPKNDKATILGDTIQLLKDL 62
                   5677889********************997....79**************9998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:4.10.280.102.3E-121284IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088813.0011262IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474598.9E-141281IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000835.31E-71367No hitNo description
PfamPF000102.1E-71362IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.6E-71868IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 284 aa     Download sequence    Send to blast
MSEVEPMDCT AARKTLKADR EKLRRDRLNE QFVELGNILD PDRPKNDKAT ILGDTIQLLK  60
DLTSQVSKLK DEYTTLNEES CELSQEKNDL REEKASLKSD IERLNNQYQQ QLRTMSPWTA  120
MDHSVMLAPP SYPYPMPMPM PIPPAPIGMQ PYPFYANQHS GIIPNPCSTF VPYLVPNTFV  180
EQQSTQHISP PLHPGFQSCV SGKQESSNKS SKESKAEKQE DSNDVTADLT PGFADQDLLS  240
GQRKCSMLSR KESSCTELSS LGRSSLSCSI QDSSSSSVVH EHKG
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_34930
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0935590.0BT093559.1 Soybean clone JCVI-FLGm-14O3 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020202878.10.0transcription factor bHLH121 isoform X1
SwissprotQ9LT235e-80BH121_ARATH; Transcription factor bHLH121
TrEMBLA0A151RAK30.0A0A151RAK3_CAJCA; Transcription factor bHLH121 family
STRINGGLYMA12G02740.11e-146(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF22823376
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19860.18e-71bHLH family protein
Publications ? help Back to Top
  1. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]
  2. Min JH, et al.
    Arabidopsis Basic Helix-Loop-Helix 34 (bHLH34) Is Involved in Glucose Signaling through Binding to a GAGA Cis-Element.
    Front Plant Sci, 2017. 8: p. 2100
    [PMID:29321786]