PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_35118
Common NameKK1_036818
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family bHLH
Protein Properties Length: 169aa    MW: 18913.3 Da    PI: 8.3303
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_35118genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.85.3e-104787954
                   HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
            HLH  9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                    r RR+ri ++f  L++++P        K++ +++Le+A++Y+k L
  C.cajan_35118 47 ARERRHRISDRFKILQSMVPGG-----SKMDTVSMLEEAIQYVKFL 87
                   699*****************95.....5****************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.4533887IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474595.89E-144398IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.3E-124493IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.104.1E-124491IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.71E-134491No hitNo description
PfamPF000101.5E-74787IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 169 aa     Download sequence    Send to blast
MDHNTAISNP ASSAGSSSKA SRNKELKKGA KKCKGVKLST DPQSVAARER RHRISDRFKI  60
LQSMVPGGSK MDTVSMLEEA IQYVKFLKAQ IWLHQTMINF MDDNSINDSP SPLYLSECCF  120
PSQQHFVYPQ QNSSLDYGVQ NVPHVPLAQC SFQGEDTTYF DASLQHWPA
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_35118
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150421e-81AP015042.1 Vigna angularis var. angularis DNA, chromosome 9, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020239949.11e-126transcription factor bHLH140
TrEMBLA0A151RGV21e-125A0A151RGV2_CAJCA; Transcription factor bHLH140 family
STRINGXP_007134758.11e-72(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF71672846
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G01310.13e-33APRATAXIN-like