PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_35467
Common NameKK1_037170
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family WOX
Protein Properties Length: 221aa    MW: 25791.1 Da    PI: 9.3995
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_35467genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox63.92.3e-202180357
                   --SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
       Homeobox  3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                   +R+++t+eql +Leel+++  r+psa+++++++++l    +++ ++V++WFqN++a++++
  C.cajan_35467 21 SRWSPTTEQLMILEELYRSgIRTPSASQIQQITTHLsfygRIEGKNVFYWFQNHKARDRQ 80
                   7*****************99*************************************996 PP
2Wus_type_Homeobox1184.1e-382081364
  Wus_type_Homeobox  3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64
                       ++RW+Pt+eQ++iLeely+sG+rtP++++iq+it++L+ yG+ie+kNVfyWFQN+kaR+rqk
      C.cajan_35467 20 SSRWSPTTEQLMILEELYRSGIRTPSASQIQQITTHLSFYGRIEGKNVFYWFQNHKARDRQK 81
                       79***********************************************************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5007110.4461681IPR001356Homeobox domain
SMARTSM003894.2E-41885IPR001356Homeobox domain
Gene3DG3DSA:1.10.10.604.2E-82180IPR009057Homeodomain-like
PfamPF000466.3E-182180IPR001356Homeobox domain
SuperFamilySSF466894.19E-112181IPR009057Homeodomain-like
CDDcd000860.00162281No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0008283Biological Processcell proliferation
GO:0009908Biological Processflower development
GO:0009943Biological Processadaxial/abaxial axis specification
GO:0009947Biological Processcentrolateral axis specification
GO:0010865Biological Processstipule development
GO:0048513Biological Processanimal organ development
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 221 aa     Download sequence    Send to blast
FPVSRNSSHR ERNMSPATGS SRWSPTTEQL MILEELYRSG IRTPSASQIQ QITTHLSFYG  60
RIEGKNVFYW FQNHKARDRQ KLRRKLTKQL QLQQQQQQQQ LQLHHCQLNQ DITNHYVAYP  120
PPILEVMEKL NNVCFSTFFI SYVQGRAANT SEQAFNCKWS VYNNPQSNLV EKKETTFCNY  180
GWTTLVDAYQ ASSCCTRPLK TLDLFPLTTT RINEDCTTPP K
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_35467
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150371e-111AP015037.1 Vigna angularis var. angularis DNA, chromosome 4, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020240226.11e-121WUSCHEL-related homeobox 3
TrEMBLA0A151RG671e-165A0A151RG67_CAJCA; WUSCHEL-related homeobox 3 (Fragment)
STRINGGLYMA07G15710.29e-88(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF106322940
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28610.11e-33WOX family protein