PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_36273
Common NameKK1_040017
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family bHLH
Protein Properties Length: 300aa    MW: 34159.9 Da    PI: 8.1074
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_36273genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH41.52.3e-1398149155
                    CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
            HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                    +r +h  +Er+RR+++N+ ++ Lr+l+P++   + ++ + a+i+  A+e++k+L+
  C.cajan_36273  98 QRITHITVERNRRKQMNEHLSVLRSLMPES---YVQRGDQASIVGGAIEFVKELE 149
                    799***************************...9******************995 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000831.72E-1296153No hitNo description
SuperFamilySSF474593.53E-1696166IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088814.68497148IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.4E-1098149IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.105.5E-1399163IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.2E-9103154IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 300 aa     Download sequence    Send to blast
MALETLSSNE FSNFILYDTI SATPYTNHDS SEASFLESLV NYQEHDPAYD NYAMRTRKRQ  60
ASEPEIIGKK QNVVGVQSRK KRRRKPRVCK NKEEAETQRI THITVERNRR KQMNEHLSVL  120
RSLMPESYVQ RGDQASIVGG AIEFVKELEH LLQSLEARKL QLLQQEVAQT NENTAISKLM  180
QPPFAEFFLY PQYTWSQTPN KYTSKTKAAI ADIEVTLIET HANLRILTRR SPGLLTKLIA  240
GFQTLHLTIL HLNVTTIDPL VFYSISAKVE EGFQLGSVDG IATAVHHLLA RIEEEASLCC
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17884RKKRRRK
27885RKKRRRKP
37984KKRRRK
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_36273
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0943130.0BT094313.1 Soybean clone JCVI-FLGm-24B24 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020203710.10.0transcription factor bHLH71
SwissprotQ9C7T49e-71BH096_ARATH; Transcription factor bHLH96
TrEMBLA0A151R8870.0A0A151R887_CAJCA; Transcription factor bHLH96
STRINGXP_007156419.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF106443138
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72210.19e-71bHLH family protein
Publications ? help Back to Top
  1. Skinner MK,Rawls A,Wilson-Rawls J,Roalson EH
    Basic helix-loop-helix transcription factor gene family phylogenetics and nomenclature.
    Differentiation, 2010. 80(1): p. 1-8
    [PMID:20219281]
  2. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]