PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_36375
Common NameKK1_039227
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family HSF
Protein Properties Length: 493aa    MW: 54295.6 Da    PI: 4.5357
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_36375genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind116.61.5e-36211122102
                    HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXX CS
   HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkelleki 97 
                    Fl+k+y+++ed++++ ++sws+++nsfvv+d+ efa+++LpkyFkh+nf+SFvRQLn+YgF+kv+ ++         weF+++ F +g+k+ll++i
  C.cajan_36375  21 FLSKTYDMVEDPSTDAIVSWSATNNSFVVWDPPEFARDLLPKYFKHNNFSSFVRQLNTYGFRKVDPDR---------WEFANEGFLRGQKHLLRSI 107
                    9********************999*****************************************999.........******************* PP

                    XXXXX CS
   HSF_DNA-bind  98 krkks 102
                     r+k 
  C.cajan_36375 108 TRRKP 112
                    **986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.102.7E-4014104IPR011991Winged helix-turn-helix DNA-binding domain
SuperFamilySSF467852.31E-3616110IPR011991Winged helix-turn-helix DNA-binding domain
SMARTSM004151.2E-6417110IPR000232Heat shock factor (HSF)-type, DNA-binding
PfamPF004479.8E-3321110IPR000232Heat shock factor (HSF)-type, DNA-binding
PRINTSPR000562.7E-202144IPR000232Heat shock factor (HSF)-type, DNA-binding
PRINTSPR000562.7E-205971IPR000232Heat shock factor (HSF)-type, DNA-binding
PROSITE patternPS0043406084IPR000232Heat shock factor (HSF)-type, DNA-binding
PRINTSPR000562.7E-207284IPR000232Heat shock factor (HSF)-type, DNA-binding
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 493 aa     Download sequence    Send to blast
MDGGGSTPAA PIPNANAPPP FLSKTYDMVE DPSTDAIVSW SATNNSFVVW DPPEFARDLL  60
PKYFKHNNFS SFVRQLNTYG FRKVDPDRWE FANEGFLRGQ KHLLRSITRR KPAHGHNQPA  120
QQPHGQSSSV GACVEVGKFG LEEEVERLKR DKNVLMQELV RLRQQQQTTD SQLQAMVQRL  180
QGMEQRQQQM MSFLAKAVQS PGFFAQFVQQ QQNDSNRRIS EVNKKRRLKQ EGIAETENAA  240
APDGQIIKYQ PLMNEAATAM LRQIMKWDTS RVESLSKNTD NYMIGDTSSS SSAMDSSSSS  300
GWTSGVTLQE VSPATVQSSR APAATGTQGL VPSTVKPEIV SVPPQAVASE KVTKDGTPDA  360
PSIPVSEADV MMPDLPPITE MVTGNILDIP EENYMAPETD EGYMDPSSLG VIGSFPVDFE  420
GISPDADIDD LLGNPSIWDD LLQTPVPEDI DTNVAEVSKG NEVQPTENGW NKTQHMDHLT  480
EQMGLLSSDA KRV
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5d5u_B8e-2911108129Heat shock factor protein 1
5d5v_B8e-2911108129Heat shock factor protein 1
5d5v_D8e-2911108129Heat shock factor protein 1
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1222229NKKRRLKQ
2223228KKRRLK
Functional Description ? help Back to Top
Source Description
UniProtDNA-binding protein that specifically binds heat shock promoter elements (HSE) and activates transcription. {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_36375
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150430.0AP015043.1 Vigna angularis var. angularis DNA, chromosome 10, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020203073.10.0heat shock factor protein HSF8
RefseqXP_020203074.10.0heat shock factor protein HSF8
RefseqXP_029125135.10.0heat shock factor protein HSF8
SwissprotQ401521e-168HSF8_SOLLC; Heat shock factor protein HSF8
TrEMBLA0A151R9Y30.0A0A151R9Y3_CAJCA; Heat shock factor protein HSF8
STRINGGLYMA01G01990.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF18433169
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G32330.11e-136heat shock transcription factor A1D
Publications ? help Back to Top
  1. Zhu B, et al.
    Identification and characterization of a novel heat shock transcription factor gene, GmHsfA1, in soybeans (Glycine max).
    J. Plant Res., 2006. 119(3): p. 247-56
    [PMID:16570125]
  2. Cai SY, et al.
    HsfA1a upregulates melatonin biosynthesis to confer cadmium tolerance in tomato plants.
    J. Pineal Res., 2017.
    [PMID:28095626]
  3. Zhou J, et al.
    Heat Shock Factor HsfA1a Is Essential for R Gene-Mediated Nematode Resistance and Triggers H2O2 Production1.
    Plant Physiol., 2018. 176(3): p. 2456-2471
    [PMID:29339397]