PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

C.cajan_36760

Common Name

KK1_041213

Organism

Cajanus cajan

Taxonomic ID

3821

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus

Family

Nin-like

Protein Properties

Length: 103aa MW: 11929.1 Da PI: 10.7033

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
C.cajan_36760	genome	IIPG	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	61.6	1.3e-19	6	54	3	51
RWP-RK 3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiks 51 ++++l dls yF+ pik+ Ak L+v+++v+K+ CR+ + RWP+Rk+ks C.cajan_36760 6 AKMTLGDLSDYFHIPIKETAKLLEVSTSVVKKVCRKAELYRWPQRKVKS 54 6899*******************************************98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51519	14.959	1	75	IPR003035	RWP-RK domain
Gene3D	G3DSA:1.10.10.10	7.2E-4	3	48	IPR011991	Winged helix-turn-helix DNA-binding domain
Pfam	PF02042	2.4E-18	7	54	IPR003035	RWP-RK domain

Sequence ? help Back to Top
Protein Sequence Length: 103 aa Download sequence Send to blast
QRERVAKMTL GDLSDYFHIP IKETAKLLEV STSVVKKVCR KAELYRWPQR KVKSNMRKIT 60 VLRRGLANPG TREKTRVEIQ RLQQEMVEYC GGLAPTGIEM LQV

Cis-element ? help Back to Top
Source	Link
PlantRegMap	C.cajan_36760

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020204700.1	3e-68	uncharacterized protein LOC109790026 isoform X1
Refseq	XP_029128279.1	6e-71	protein RKD3-like
TrEMBL	A0A151R4P8	2e-69	A0A151R4P8_CAJCA; Uncharacterized protein (Fragment)
STRING	XP_007136870.1	5e-33	(Phaseolus vulgaris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF7478	28	46

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G53040.1	3e-10	RWP-RK domain-containing protein