PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_37134
Common NameKK1_036959
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family B3
Protein Properties Length: 126aa    MW: 14550.1 Da    PI: 5.1795
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_37134genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B353.25.3e-171781799
                   E--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
             B3 17 vlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99
                   ++p++f++++g++      ++l+ ++g +Wev    +k++   ++++kGW++F+k   L  g f+vF+++g s+f   v +f+ 
  C.cajan_37134  1 MIPRSFVKRYGEE--LLNPVMLKLPNGAKWEVHW--TKCDHDdIYFEKGWENFAKHYSLSNGHFLVFRYEGGSQF--QVLIFDG 78
                   69********855..5667***************..777766799*************************99999..9999885 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd100179.61E-17177No hitNo description
SMARTSM010195.5E-7179IPR003340B3 DNA binding domain
PfamPF023621.3E-13178IPR003340B3 DNA binding domain
PROSITE profilePS5086314.833179IPR003340B3 DNA binding domain
SuperFamilySSF1019362.16E-19178IPR015300DNA-binding pseudobarrel domain
Gene3DG3DSA:2.40.330.105.4E-20278IPR015300DNA-binding pseudobarrel domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 126 aa     Download sequence    Send to blast
MIPRSFVKRY GEELLNPVML KLPNGAKWEV HWTKCDHDDI YFEKGWENFA KHYSLSNGHF  60
LVFRYEGGSQ FQVLIFDGSA LEIDYPTSNS STHHAEGTNT SHEDVEEIDD DSPLPRKQKA  120
NPGNFF
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_37134
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_029124773.11e-88B3 domain-containing transcription factor VRN1
TrEMBLA0A151RGH52e-90A0A151RGH5_CAJCA; B3 domain-containing protein At1g49475 family
STRINGAES970516e-39(Medicago truncatula)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF9834369
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49475.16e-23B3 family protein