PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_37599
Common NameKK1_038083
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family bHLH
Protein Properties Length: 283aa    MW: 31673.8 Da    PI: 8.646
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_37599genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH41.72.1e-13102153155
                    CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
            HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                    +r++h ++Er+RR+++N+ ++ Lr+l+P++   + ++ + a+i   A++++k+L+
  C.cajan_37599 102 QRMTHIAVERNRRKQMNEYLAVLRSLMPSS---YVQRGDQASIIGGAINFVKELE 153
                    79****************************...9******************995 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000831.18E-13100157No hitNo description
SuperFamilySSF474593.79E-17101170IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.288101152IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.2E-10102153IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.106.9E-14102170IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003533.8E-10107158IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 283 aa     Download sequence    Send to blast
MALEAVVFPQ DPFGYGCKDY LYSLVGATAN YAFQAPEQEK VVLGIINNNN NNNNIQHHAN  60
WDSHSHSSPE PPSSSSAAAT STSRRKRRRT KSAKNKEEIE NQRMTHIAVE RNRRKQMNEY  120
LAVLRSLMPS SYVQRGDQAS IIGGAINFVK ELEQLLQSME GQKRRKEGQV QEDVGPNGSP  180
FAEFFTFPQY TTRGTQLADI EVTMVDSHAN IKILSKKQHA HLMKLVLGLQ TLSLSILHLN  240
VTTLHDTVLY SISVKVEEGC QLNTVDEIAG AVNQLLRTIQ QLN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
18488RKRRR
28489RKRRRT
3102113RMTHIAVERNRR
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_37599
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0979371e-88BT097937.1 Soybean clone JCVI-FLGm-22B18 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020202121.10.0transcription factor bHLH94
SwissprotQ9SK916e-91BH094_ARATH; Transcription factor bHLH94
TrEMBLA0A151RDA10.0A0A151RDA1_CAJCA; Transcription factor bHLH94
STRINGGLYMA06G10470.11e-135(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF71834135
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G22490.11e-84bHLH family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  2. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]