PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_37639
Common NameKK1_042499
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family bHLH
Protein Properties Length: 331aa    MW: 37168.4 Da    PI: 9.49
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_37639genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH49.48.3e-16178224455
                    HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
            HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     hn+ ErrRRd+iN+++  L++l+P++      K +Ka++L ++++Y+k+Lq
  C.cajan_37639 178 VHNQSERRRRDKINQRMKALQKLVPNS-----SKTDKASMLDEVIQYMKQLQ 224
                    6*************************8.....7******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088817.911174223IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.16E-18176241IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.108.5E-19178231IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.5E-13178224IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000834.36E-16179228No hitNo description
SMARTSM003536.0E-18180229IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 331 aa     Download sequence    Send to blast
MSQRVPSCDV EDHNNVNIPT PTKTPLPIPN SNFIPHEVPM FGYQGQVACI QGQPRTVTSG  60
ASGGAAGTLE SIVNNNQHNL VTMDALVPSF MQQPQAVVAR VPTTRDFSSS TRDWSVSATD  120
TCPRDLSAAA FNSASTTYDD RDSISHLRSQ SEARNEDYKR RRVDRSSESN KRIKASAVHN  180
QSERRRRDKI NQRMKALQKL VPNSSKTDKA SMLDEVIQYM KQLQAQVEMM NWMKMYSSMM  240
LPTITMQQQL KMSMMMAHMC IGMGMNKDVI MNMNNMNMNI PVIPPLLHPA PFLSMRDQLQ  300
GAQDKSVNME AYGMAALYHQ LYNSSYSSSK T
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1158162KRRRV
2182187ERRRRD
3183188RRRRDK
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_37639
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKT0311001e-115KT031100.1 Glycine max clone HN_CCL_212 bHLH transcription factor (Glyma03g04000.1) mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020205627.10.0transcription factor UNE10
TrEMBLA0A151R1J50.0A0A151R1J5_CAJCA; Transcription factor UNE10
STRINGGLYMA03G04000.11e-106(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF56763347
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00050.18e-36bHLH family protein