PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_37714
Common NameKK1_037562
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family C2H2
Protein Properties Length: 210aa    MW: 22925.6 Da    PI: 7.8993
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_37714genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H210.90.0014117139123
                    EEETTTTEEESSHHHHHHHHHHT CS
        zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                    ++C+ C+k+F ++  L  H  +H
  C.cajan_37714 117 FECSSCNKVFGSHQALGGHRASH 139
                    89************999999888 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576678.73E-71740No hitNo description
SMARTSM003550.021840IPR015880Zinc finger, C2H2-like
PfamPF139123.0E-71842IPR007087Zinc finger, C2H2
PROSITE profilePS501579.5981845IPR007087Zinc finger, C2H2
Gene3DG3DSA:3.30.160.605.6E-41940IPR013087Zinc finger C2H2-type/integrase DNA-binding domain
PROSITE patternPS0002802040IPR007087Zinc finger, C2H2
SMARTSM003550.21117139IPR015880Zinc finger, C2H2-like
PfamPF139124.4E-10117140IPR007087Zinc finger, C2H2
PROSITE profilePS5015710.554117144IPR007087Zinc finger, C2H2
PROSITE patternPS000280119139IPR007087Zinc finger, C2H2
SuperFamilySSF576678.73E-7151178No hitNo description
SMARTSM003550.13156178IPR015880Zinc finger, C2H2-like
PROSITE profilePS501579.369156178IPR007087Zinc finger, C2H2
PfamPF139124.6E-12156180IPR007087Zinc finger, C2H2
PROSITE patternPS000280158178IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0048235Biological Processpollen sperm cell differentiation
GO:0003676Molecular Functionnucleic acid binding
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 210 aa     Download sequence    Send to blast
MGDDAWKGKR SEAEGEPRPC TECGKKFWSW KALFGHMRCH PERQWRGINP PPNLNLMRAQ  60
QQPRDEQVSV SMSMSMTQED HEVAACLLLL ANANANANAN ANANANANAN ASCSDQFECS  120
SCNKVFGSHQ ALGGHRASHK NVKGCFANSE ENNNGHKCSI CQRVFSTGQA LGGHKRCHWD  180
KPFHSLDLNL PPPSSSSSSP PLTLDLTLGL
Functional Description ? help Back to Top
Source Description
UniProtMediates the regulation of male germ cell division by DUO1. {ECO:0000269|PubMed:24876252}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_37714
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Activated by the transcription factor DUO1. {ECO:0000269|PubMed:21285328}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020240536.21e-155zinc finger protein ZAT3
SwissprotO654994e-67ZAT3_ARATH; Zinc finger protein ZAT3
TrEMBLA0A151RES61e-154A0A151RES6_CAJCA; Uncharacterized protein
STRINGXP_007131374.12e-79(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF6667710
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35280.11e-54C2H2-like zinc finger protein