PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

C.cajan_37748

Common Name

KK1_041191

Organism

Cajanus cajan

Taxonomic ID

3821

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus

Family

TCP

Protein Properties

Length: 231aa MW: 25301.3 Da PI: 9.571

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
C.cajan_37748	genome	IIPG	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	125.3	6.4e-39	25	142	2	107
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg........ 88 ++k+ ++++hTkv+gR+RR+R++a caar+F+L++eLG+ +d++tieWLl+qa+pa+ ++tgt++++a+++ + s +ssas+ ss+ C.cajan_37748 25 PKKRPATKDRHTKVEGRGRRIRMPAACAARVFQLTRELGHRSDGETIEWLLRQAEPAVVAATGTGTIPANFTsLNLSARSSASSLSSPslffnrha 120 679999***************************************************************999866666666665555567788878 PP TCP 89 ..kaaksaa.kskksqksaasa 107 ++++++ ++ ++++s++++ C.cajan_37748 121 leYSRTFTTtTTTSTSTSTNAF 142 8733333332444444444433 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03634	2.1E-37	30	136	IPR005333	Transcription factor, TCP
PROSITE profile	PS51369	27.048	31	85	IPR017887	Transcription factor TCP subgroup

Sequence ? help Back to Top
Protein Sequence Length: 231 aa Download sequence Send to blast
MEDAICKPSG PLQLLQKKDE PDAPPKKRPA TKDRHTKVEG RGRRIRMPAA CAARVFQLTR 60 ELGHRSDGET IEWLLRQAEP AVVAATGTGT IPANFTSLNL SARSSASSLS SPSLFFNRHA 120 LEYSRTFTTT TTTSTSTSTN AFFNANYNNF LKRKHEMISH VPSTDSVPGV DVTDADSVWA 180 MNPSLSVMPS FMNFASLLTG QHASQTDFAF LPNATNLGAF SDPQHRHYGD K

Cis-element ? help Back to Top
Source	Link
PlantRegMap	C.cajan_37748

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_028213822.1	2e-65	transcription factor TCP15-like
TrEMBL	A0A151R4X6	1e-171	A0A151R4X6_CAJCA; Transcription factor TCP15
STRING	GLYMA18G15421.2	6e-65	(Glycine max)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF21331	2	3

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69690.1	8e-45	TCP family protein