PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_37903
Common NameKK1_040855
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family bHLH
Protein Properties Length: 185aa    MW: 20852.7 Da    PI: 4.6261
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_37903genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH35.91.3e-11144755
                   HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
            HLH  7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                   ++Er+RR+++ ++f  L   +P +     kK +K++iL +A++Y+k+Lq
  C.cajan_37903  1 MAERKRRQQLTERFIALSATIPGL-----KKTDKSSILCEAINYVKQLQ 44
                   58**********************.....9******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088814.672143IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.46E-9147No hitNo description
SuperFamilySSF474595.63E-16166IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.4E-10149IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000104.2E-9144IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.5E-15162IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 185 aa     Download sequence    Send to blast
MAERKRRQQL TERFIALSAT IPGLKKTDKS SILCEAINYV KQLQERVTEL EERNNRVKES  60
MIILKKTSPC VNEDTITTSG ETNSEDSYSR ASEMLPDVEA RVMENEVLIE IHCEKEDGVQ  120
LKILDQLENL DLSVTASSIM PFGNSTLGIT IIAQMGDAYG MTVNDLVKNL RQVLLSHMNN  180
NTDPY
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
127ERKRRQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_37903
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020204393.11e-132transcription factor bHLH18
TrEMBLA0A151R5Q71e-133A0A151R5Q7_CAJCA; Transcription factor bHLH19
STRINGGLYMA13G44594.14e-96(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF131101230
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22760.16e-44bHLH family protein