PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

C.cajan_37996

Common Name

KK1_037832

Organism

Cajanus cajan

Taxonomic ID

3821

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus

Family

bHLH

Protein Properties

Length: 477aa MW: 52191.1 Da PI: 5.462

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
C.cajan_37996	genome	IIPG	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	14.7	5.7e-05	371	403	17	54
HHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 17 NsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++ L++l+ + +K + a++L++Av+YIk L C.cajan_37996 371 GDRVTALQQLVSPF-----GKTDTASVLQEAVDYIKFL 403 55666677777776.....8****************98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50888	11.998	354	403	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
CDD	cd00083	1.97E-6	364	407	No hit	No description
SuperFamily	SSF47459	4.84E-11	364	421	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Gene3D	G3DSA:4.10.280.10	4.7E-8	364	415	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 477 aa Download sequence Send to blast
MAEEFQARIC GENWWSSTID STRSVFPLSS SLISSSPCSV AANDAGNYTT RQTTGIDLKP 60 TNKCCAEETN NLVSDTYLGF VEAQKPHKSE LESAMSGSGS ILIDSTLQMM GFGLTSSTSQ 120 NWNQPLLFRC NGRAESNFHS MLQEETGIDS SNYSQRDWIP KSFSSGGGNE IDDNFKPLNK 180 EFCADHHQSL SSLTSTTGLS IGSASSYGNP STLQGLLYDP DPHPHPQPQH SLFTNRPMSY 240 SSKATYGTPC TELPPTWPKV STFLKPTPIA KNHPIGLPFS NNTTFWNASA EALNDIRAGT 300 FASPQSQYQT PTFDEEKPNC PRTLLNKLNG EETLDSASMA KKNVCEPPLK RPRIETPSPL 360 PTFKVRKEKL GDRVTALQQL VSPFGKTDTA SVLQEAVDYI KFLHDQVNGL STSYMKNGAP 420 IQQQQGCDDL KESEGPQEDL KSRGLCLVPI SSTFPVATET TASAELWTPT FRGALLR

Sequence ? help Back to Top

Protein Sequence Length: 477 aa Download sequence Send to blast

MAEEFQARIC GENWWSSTID STRSVFPLSS SLISSSPCSV AANDAGNYTT RQTTGIDLKP  60
TNKCCAEETN NLVSDTYLGF VEAQKPHKSE LESAMSGSGS ILIDSTLQMM GFGLTSSTSQ  120
NWNQPLLFRC NGRAESNFHS MLQEETGIDS SNYSQRDWIP KSFSSGGGNE IDDNFKPLNK  180
EFCADHHQSL SSLTSTTGLS IGSASSYGNP STLQGLLYDP DPHPHPQPQH SLFTNRPMSY  240
SSKATYGTPC TELPPTWPKV STFLKPTPIA KNHPIGLPFS NNTTFWNASA EALNDIRAGT  300
FASPQSQYQT PTFDEEKPNC PRTLLNKLNG EETLDSASMA KKNVCEPPLK RPRIETPSPL  360
PTFKVRKEKL GDRVTALQQL VSPFGKTDTA SVLQEAVDYI KFLHDQVNGL STSYMKNGAP  420
IQQQQGCDDL KESEGPQEDL KSRGLCLVPI SSTFPVATET TASAELWTPT FRGALLR

Cis-element ? help Back to Top
Source	Link
PlantRegMap	C.cajan_37996

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_029124929.1	0.0	transcription factor bHLH112
TrEMBL	A0A151REA1	0.0	A0A151REA1_CAJCA; Transcription factor bHLH123 family
STRING	GLYMA07G30745.1	0.0	(Glycine max)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF1118	33	106

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G20640.1	5e-56	bHLH family protein