PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_38519
Common NameKK1_041199
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family GATA
Protein Properties Length: 144aa    MW: 16607 Da    PI: 9.8682
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_38519genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA374.7e-12127935
           GATA  9 TplWRrgpdgnktLCnaCGlyyrkkgl 35
                   TplWR+gp+ ++ LCnaCG +yrk g+
  C.cajan_38519  1 TPLWRNGPEDKPVLCNACGSRYRKWGT 27
                   9*******88888**********9775 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd002023.85E-9127No hitNo description
SuperFamilySSF577161.62E-7133No hitNo description
Gene3DG3DSA:3.30.50.109.4E-9127IPR013088Zinc finger, NHR/GATA-type
PfamPF003208.5E-10127IPR000679Zinc finger, GATA-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0008270Molecular Functionzinc ion binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 144 aa     Download sequence    Send to blast
TPLWRNGPED KPVLCNACGS RYRKWGTLEA YLPNNFQPKY LDNLKYLKDG KNPLVSSYVT  60
ITGDNEQPLW SPKIPSRKRS QKVYKNITPM KKFRNQLLKI WKNYRNPEES SPEEVLLLNN  120
VNNFIPSNEI GLGCALHKPD DTSA
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_38519
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020204683.11e-102GATA transcription factor 27
TrEMBLA0A151R4V71e-101A0A151R4V7_CAJCA; GATA transcription factor 28 (Fragment)
STRINGGLYMA05G30390.21e-55(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF127471024
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17570.29e-13GATA transcription factor 26