PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_38520
Common NameKK1_041200
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family GATA
Protein Properties Length: 152aa    MW: 17480.1 Da    PI: 9.8002
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_38520genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA40.73.4e-13934934
           GATA  9 TplWRrgpdgnktLCnaCGlyyrkkg 34
                   TplWR+gp+ ++ LCnaCG +yrk+g
  C.cajan_38520  9 TPLWRNGPEEKPVLCNACGSRYRKRG 34
                   9*******99999***********98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM004010.0047954IPR000679Zinc finger, GATA-type
SuperFamilySSF577162.0E-7939No hitNo description
Gene3DG3DSA:3.30.50.101.2E-9935IPR013088Zinc finger, NHR/GATA-type
PfamPF003206.4E-11935IPR000679Zinc finger, GATA-type
CDDcd002021.02E-71234No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0008270Molecular Functionzinc ion binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 152 aa     Download sequence    Send to blast
MVLLLLPVTP LWRNGPEEKP VLCNACGSRY RKRGNLEDYL PTHFQPEYLD NLKKLKGKHN  60
VLVSSYDSGW ENPYFWSHKI PSRRRSQVVC KNITPMKRFG KQLHKMWKRY GNLDESSPEE  120
VLLLNNVNNF IPSNEIGLGG VLLKPDDTSA SA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
13055RKRGNLEDYLPTHFQPEYLDNLKKLK
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_38520
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_029125405.17e-91GATA transcription factor 27
RefseqXP_029125406.17e-91GATA transcription factor 27
TrEMBLA0A151R4W71e-108A0A151R4W7_CAJCA; GATA transcription factor 29
STRINGGLYMA05G30390.23e-57(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF127471024
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47140.14e-15GATA transcription factor 27