PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_38793
Common NameKK1_034164
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family bHLH
Protein Properties Length: 91aa    MW: 10381.7 Da    PI: 8.5213
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_38793genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH24.64.4e-0819581554
                   HHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
            HLH 15 riNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54
                   +i +  ++Lr+l+P+ +   +s K+s + +L+++++YI+sL
  C.cajan_38793 19 QIIDLVSKLRQLVPEiR-DRRSDKVSASKVLQETCNYIRSL 58
                   5667779********76.99*******************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088810.626458IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.8E-51958IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.108.5E-91974IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474592.09E-92078IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 91 aa     Download sequence    Send to blast
MSSRRSRQQS SSTRISDDQI IDLVSKLRQL VPEIRDRRSD KVSASKVLQE TCNYIRSLHR  60
EVDDLSERLS QLLATIDADS PEAAIIRSLI N
Functional Description ? help Back to Top
Source Description
UniProtAtypical and probable non DNA-binding bHLH transcription factor that integrates multiple signaling pathways to regulate cell elongation and plant development. May have a regulatory role in various aspects of gibberellin-dependent growth and development. {ECO:0000269|PubMed:16527868}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_38793
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKT0311281e-110KT031128.1 Glycine max clone HN_CCL_66 bHLH transcription factor (Glyma19g02510.1) mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020237793.14e-56transcription factor PRE5
SwissprotQ9LJX11e-43PRE5_ARATH; Transcription factor PRE5
TrEMBLA0A151RP941e-54A0A151RP94_CAJCA; Transcription factor bHLH135 family
STRINGGLYMA13G05280.14e-55(Glycine max)
STRINGGLYMA19G02510.14e-55(Glycine max)
STRINGXP_007151219.14e-55(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF56734143
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G26945.12e-34bHLH family protein